RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 ADSSL1Q8N142 457 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 TMX1Q9H3N1 280 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 ATP6V0A4Q9HBG4 840 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 JPH1Q9HDC5 661 aaPredicted RBP13□□□□□ -0.33
CHMP6-202ENST00000571457 RGS18Q9NS28 235 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 TYW1Q9NV66 732 aaKnown RBP13□□□□□ -0.33
CHMP6-202ENST00000571457 LOXHD1Q8IVV2 1947 aa13□□□□□ -0.33
CHMP6-202ENST00000571457 FNDC1Q4ZHG4 1894 aaPredicted RBP12.99□□□□□ -0.33
CHMP6-202ENST00000571457 MEIS2O14770 477 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 GPR182O15218 404 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 RPS6KA5O75582 802 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 ITGB5P18084 799 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 MTHFRP42898 656 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 KRT17Q04695 432 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 TROAPQ12815 778 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 HDAC1Q13547 482 aaPredicted RBP12.99□□□□□ -0.33
CHMP6-202ENST00000571457 WTAPQ15007 396 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 TMEM266Q2M3C6 531 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 FAM102BQ5T8I3 360 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 CYB5R4Q7L1T6 521 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 PLPPR4Q7Z2D5 763 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 ZBTB10Q96DT7 871 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 RRP36Q96EU6 259 aaKnown RBP12.99□□□□□ -0.33
CHMP6-202ENST00000571457 ADAM2Q99965 735 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 APOL5Q9BWW9 433 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 TMEM161AQ9NX61 479 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 SEC63Q9UGP8 760 aaKnown RBP12.99□□□□□ -0.33
CHMP6-202ENST00000571457 GINS2Q9Y248 185 aa12.99□□□□□ -0.33
CHMP6-202ENST00000571457 HIDE1A8MVS5 230 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 C2CD4DB7Z1M9 353 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 HOXA2O43364 376 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 SLC26A2P50443 739 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 APOBRQ0VD83 1088 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 BMS1Q14692 1282 aaKnown RBP12.98□□□□□ -0.33
CHMP6-202ENST00000571457 PLCB4Q15147 1175 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 TMC7Q7Z402 723 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 PLCD3Q8N3E9 789 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 TDRD5Q8NAT2 981 aaKnown RBP12.98□□□□□ -0.33
CHMP6-202ENST00000571457 SPZ1Q9BXG8 430 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 LNPKQ9C0E8 428 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 ELAC1Q9H777 363 aaKnown RBP12.98□□□□□ -0.33
CHMP6-202ENST00000571457 PSTPIP2Q9H939 334 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 ERVK-5Q9HDB9 667 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 PKD2L1Q9P0L9 805 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 SLC9A2Q9UBY0 812 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 UBIAD1Q9Y5Z9 338 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 ACACBO00763 2458 aa12.98□□□□□ -0.33
CHMP6-202ENST00000571457 SPDYE3A6NKU9 549 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 C9IYK1 514 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 MGEA5O60502 916 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 PDE4AP27815 886 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 SMARCA1P28370 1054 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 KIF5BP33176 963 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 STAT5BP51692 787 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 MTHFD1LQ6UB35 978 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 ZDHHC14Q8IZN3 488 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
CHMP6-202ENST00000571457 TRAPPC12Q8WVT3 735 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 ZNF558Q96NG5 402 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 PCYT2Q99447 389 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 MAP3K14Q99558 947 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 LZTS2Q9BRK4 669 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 SDF4Q9BRK5 362 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 TMEM117Q9H0C3 514 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 OSBPL3Q9H4L5 887 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 CWH43Q9H720 699 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 JADE2Q9NQC1 790 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 ST3GAL5Q9UNP4 418 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 USTQ9Y2C2 406 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 NOC2LQ9Y3T9 749 aaKnown RBP12.97□□□□□ -0.33
CHMP6-202ENST00000571457 DMXL1Q9Y485 3027 aa12.97□□□□□ -0.33
CHMP6-202ENST00000571457 FGFR1P11362 822 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 KLRC1P26715 233 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 FAM189BP81408 668 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 SMC1AQ14683 1233 aaKnown RBP12.96□□□□□ -0.33
CHMP6-202ENST00000571457 ATAT1Q5SQI0 421 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 KCNT2Q6UVM3 1135 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 RALYLQ86SE5 291 aaKnown RBP12.96□□□□□ -0.33
CHMP6-202ENST00000571457 ABI1Q8IZP0 508 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 LRRC43Q8N309 656 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 SPG21Q9NZD8 308 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 HCSTQ9UBK5 93 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 HCFC2Q9Y5Z7 792 aa12.96□□□□□ -0.33
CHMP6-202ENST00000571457 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
CHMP6-202ENST00000571457 FRYLO94915 3013 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 NFASCO94856 1347 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 HBP1O60381 514 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 ACTR2P61160 394 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 MRPL43Q8N983 215 aaKnown RBP12.95□□□□□ -0.34
CHMP6-202ENST00000571457 TMEM87AQ8NBN3 555 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 FLCNQ8NFG4 579 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 SEMA4AQ9H3S1 761 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 KCNH7Q9NS40 1196 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 DZANK1Q9NVP4 752 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 LIMD1Q9UGP4 676 aa12.95□□□□□ -0.34
CHMP6-202ENST00000571457 DBR1Q9UK59 544 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms