RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 MGAT3Q09327 533 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 PPP2R5CQ13362 524 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 HAS1Q92839 578 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 TIFAQ96CG3 184 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 FAM167AQ96KS9 214 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 MSRAQ9UJ68 235 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 CEP131Q9UPN4 1083 aa14.28□□□□□ -0.12
TVP23B-204ENST00000571018 KAT6AQ92794 2004 aa14.27□□□□□ -0.12
TVP23B-204ENST00000571018 LAMA3Q16787 3333 aa14.27□□□□□ -0.12
TVP23B-204ENST00000571018 OATP04181 439 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 KCNJ6P48051 423 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 MRPS6P82932 125 aaKnown RBP14.27□□□□□ -0.13
TVP23B-204ENST00000571018 UGCGQ16739 394 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 IER5Q5VY09 327 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 TRMT1LQ7Z2T5 733 aaKnown RBP14.27□□□□□ -0.13
TVP23B-204ENST00000571018 SLFN12Q8IYM2 578 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 NME8Q8N427 588 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 SEPT8Q92599 483 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 FAM161BQ96MY7 647 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 FAM49AQ9H0Q0 323 aaPredicted RBP14.27□□□□□ -0.13
TVP23B-204ENST00000571018 FOXP1Q9H334 677 aaPredicted RBP14.27□□□□□ -0.13
TVP23B-204ENST00000571018 NRBP2Q9NSY0 501 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 VAV3Q9UKW4 847 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 PCDHA11Q9Y5I1 949 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 CDY2AQ9Y6F7 541 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 TET1Q8NFU7 2136 aa14.27□□□□□ -0.13
TVP23B-204ENST00000571018 RBAK-RBAKDNI3L0D1 243 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 MARCH6O60337 910 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 BAG4O95429 457 aaKnown RBP14.26□□□□□ -0.13
TVP23B-204ENST00000571018 C22orf31O95567 290 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 RABGGTBP53611 331 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 PRKCEQ02156 737 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 HERC6Q8IVU3 1022 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 APBB2Q92870 758 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 GUCD1Q96NT3 240 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 ZNF576Q9H609 170 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 YBX2Q9Y2T7 364 aaKnown RBP14.26□□□□□ -0.13
TVP23B-204ENST00000571018 SQORQ9Y6N5 450 aa14.26□□□□□ -0.13
TVP23B-204ENST00000571018 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 M0QZ92 97 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 EML1O00423 815 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 WNT7AO00755 349 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 MAGEB2O15479 319 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 STBD1O95210 358 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 GHRP10912 638 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 DEFB103AP81534 67 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 LPIN1Q14693 890 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 XKR3Q5GH77 459 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 FBXO47Q5MNV8 452 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 KIAA0319LQ8IZA0 1049 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
TVP23B-204ENST00000571018 CELF4Q9BZC1 486 aaKnown RBP14.25□□□□□ -0.13
TVP23B-204ENST00000571018 NKX2-4Q9H2Z4 354 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 SLC28A3Q9HAS3 691 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 KIF3AQ9Y496 699 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 TRPV2Q9Y5S1 764 aa14.25□□□□□ -0.13
TVP23B-204ENST00000571018 KIF28PB7ZC32 967 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 NEMFO60524 1076 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 MYOGP15173 224 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 PSMC5P62195 406 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 SPIRE1Q08AE8 756 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 TMEM62Q0P6H9 643 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 EPHA7Q15375 998 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 TARBP2Q15633 366 aaKnown RBP14.24□□□□□ -0.13
TVP23B-204ENST00000571018 CALCRLQ16602 461 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.24□□□□□ -0.131e-7■■■■□ 23.8
TVP23B-204ENST00000571018 BANK1Q8NDB2 785 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 MTMR9Q96QG7 549 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 CDX2Q99626 313 aaPredicted RBP14.24□□□□□ -0.13
TVP23B-204ENST00000571018 NIFKQ9BYG3 293 aaKnown RBP14.24□□□□□ -0.13
TVP23B-204ENST00000571018 PCDHA12Q9UN75 941 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 STXBP5LQ9Y2K9 1186 aa14.24□□□□□ -0.13
TVP23B-204ENST00000571018 DKC1O60832 514 aaKnown RBP eCLIP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 GJB5O95377 273 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 AMHP03971 560 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 P4HBP07237 508 aaKnown RBP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 U2AF2P26368 475 aaKnown RBP eCLIP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 TIE1P35590 1138 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 GRIN2CQ14957 1233 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 TSHZ1Q6ZSZ6 1077 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 TMCO2Q7Z6W1 182 aaPredicted RBP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 NOSTRINQ8IVI9 506 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 LINC01465Q8N7H1 131 aa14.23□□□□□ -0.13
TVP23B-204ENST00000571018 AGO3Q9H9G7 860 aaKnown RBP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 MYH9P35579 1960 aaKnown RBP14.23□□□□□ -0.13
TVP23B-204ENST00000571018 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.22□□□□□ -0.13
TVP23B-204ENST00000571018 TLL1O43897 1013 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 CA3P07451 260 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 ATP2B1P20020 1258 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 TMOD1P28289 359 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 GJB2P29033 226 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 MCM7P33993 719 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 TXKP42681 527 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 TRAPPC10P48553 1259 aa14.22□□□□□ -0.13
TVP23B-204ENST00000571018 ORC2Q13416 577 aaPredicted RBP14.22□□□□□ -0.13
TVP23B-204ENST00000571018 GNL2Q13823 731 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms