RNA–Protein interactions for RNA: ENST00000570871.2

PCDHB19P-201, Transcript of protocadherin beta 19 pseudogene, humanhuman

BASIC

Gene PCDHB19P, Length 2,371 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB19P-201ENST00000570871 USP8P40818 1118 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 KCTD1Q719H9 257 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 PEX26Q7Z412 305 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 CYFIP2Q96F07 1278 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 KCNMB3Q9NPA1 279 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 AMACRQ9UHK6 382 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 NENFQ9UMX5 172 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 PITPNM2Q9BZ72 1349 aa18.43■□□□□ 0.54
PCDHB19P-201ENST00000570871 DAPK3O43293 454 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 FLOT1O75955 427 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 PRKCIP41743 596 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 C6orf89Q6UWU4 347 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 UBLCP1Q8WVY7 318 aaPredicted RBP18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 BCCIPQ9P287 314 aaKnown RBP eCLIP18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 TRAF3IP3Q9Y228 551 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 TMOD1P28289 359 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 PSMC6P62333 389 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 IRX3P78415 501 aaPredicted RBP18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 GIT2Q14161 759 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 EPHA7Q15375 998 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 KNOP1Q1ED39 458 aaKnown RBP18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 DCAF17Q5H9S7 520 aaPredicted RBP18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 SLF2Q8IX21 1173 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 GGA2Q9UJY4 613 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 STXBP5LQ9Y2K9 1186 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 DAGLAQ9Y4D2 1042 aa18.42■□□□□ 0.54
PCDHB19P-201ENST00000570871 CCDC188H7C350 402 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 XRCC5P13010 732 aaKnown RBP18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 BIRC3Q13489 604 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 SLFN11Q7Z7L1 901 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 SFR1Q86XK3 245 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 SIX2Q9NPC8 291 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 SWAP70Q9UH65 585 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 GMNCA6NCL1 334 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 MEIS1O00470 390 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 TTI1O43156 1089 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 AKAP3O75969 853 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 ACTN3Q08043 901 aaPredicted RBP18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 TCERG1LQ5VWI1 586 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 GJB7Q6PEY0 223 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 RUFY4Q6ZNE9 571 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 CATSPER3Q86XQ3 398 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 RASGEF1CQ8N431 466 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 VCPKMTQ9H867 229 aa18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 SUCLA2Q9P2R7 463 aaPredicted RBP18.41■□□□□ 0.54
PCDHB19P-201ENST00000570871 JAM2P57087 298 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 EPM2AIP1Q7L775 607 aaPredicted RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 DAAM2Q86T65 1068 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 NAP1L4Q99733 375 aaKnown RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 REEP2Q9BRK0 252 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 CELF4Q9BZC1 486 aaKnown RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 CNOT8Q9UFF9 292 aaKnown RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 ANKRD31Q8N7Z5 1873 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 DDX3XO00571 662 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 TRAPPC3O43617 180 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 CASP4P49662 377 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 MTMR3Q13615 1198 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 ODF2Q5BJF6 829 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 TMC3Q7Z5M5 1100 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 NT5DC3Q86UY8 548 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 CCDC13Q8IYE1 715 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 LMBR1Q8WVP7 490 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 SLITRK6Q9H5Y7 841 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 DDX4Q9NQI0 724 aaKnown RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 DDX20Q9UHI6 824 aaKnown RBP18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 GGA1Q9UJY5 639 aa18.4■□□□□ 0.54
PCDHB19P-201ENST00000570871 DCDC2CA8MYV0 355 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 MMP10P09238 476 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 PPP2R2AP63151 447 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 SPIRE1Q08AE8 756 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 QPCTQ16769 361 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 GPATCH4Q5T3I0 446 aaKnown RBP18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 AGBL2Q5U5Z8 902 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 U2AF1L4Q8WU68 220 aaKnown RBP18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 NCAPGQ9BPX3 1015 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 ANO3Q9BYT9 981 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 LRRC4CQ9HCJ2 640 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 NOVA2Q9UNW9 492 aaKnown RBP18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 RGPD3A6NKT7 1758 aaPredicted RBP18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 RGPD4Q7Z3J3 1758 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 A0A0A6YYK5 440 aaPredicted RBP18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 PDXKO00764 312 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 ATP2B4P23634 1241 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 SLC15A2Q16348 729 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 VPS36Q86VN1 386 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 SLC35C1Q96A29 364 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 DPH5Q9H2P9 285 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 BCAS3Q9H6U6 928 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 GCNT4Q9P109 453 aa18.39■□□□□ 0.53
PCDHB19P-201ENST00000570871 CYP3A7-CYP3A51PA0A087WV96 503 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 BACH1O14867 736 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 SLC26A4O43511 780 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 CALUO43852 315 aaPredicted RBP18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 CYP3A7P24462 503 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 CCDC26Q8TAB7 109 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 SEC14L1Q92503 715 aa18.38■□□□□ 0.53
PCDHB19P-201ENST00000570871 HES6Q96HZ4 224 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms