RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 LRP6O75581 1613 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 SPOPO43791 374 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 CTNND1O60716 968 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 PRLRP16471 622 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 HNRNPH1P31943 449 aaKnown RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 COG2Q14746 738 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
USP43-202ENST00000570475 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 KCNK9Q9NPC2 374 aa16.67■□□□□ 0.26
USP43-202ENST00000570475 PON1P27169 355 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 DRAP1Q14919 205 aaPredicted RBP16.66■□□□□ 0.26
USP43-202ENST00000570475 CCDC105Q8IYK2 499 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 SNX1Q13596 522 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 KAT2BQ92831 832 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 HOMER2Q9NSB8 354 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 CHD4Q14839 1912 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 HNRNPH3P31942 346 aaKnown RBP16.66■□□□□ 0.26
USP43-202ENST00000570475 AADACL2Q6P093 401 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 NSMFQ6X4W1 530 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 EPN3Q9H201 632 aa16.66■□□□□ 0.26
USP43-202ENST00000570475 ZC3H4Q9UPT8 1303 aaKnown RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 FRMD3A2A2Y4 597 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 EVI5O60447 810 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 RPS6KA5O75582 802 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 ANKRD42Q8N9B4 389 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 TBC1D31Q96DN5 1066 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP43-202ENST00000570475 AMNQ9BXJ7 453 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 GOLGA8IPA6NC78 632 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 GOLGA8JA6NMD2 632 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 ATMINO43313 823 aaPredicted RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 SORBS3O60504 671 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 GCFC2P16383 781 aaKnown RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 PTGISQ16647 500 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 SLFN12Q8IYM2 578 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 CACNA2D3Q8IZS8 1091 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 KCNQ5Q9NR82 932 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 BAIAP2L1Q9UHR4 511 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
USP43-202ENST00000570475 GAS7O60861 476 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 MYCBPAPQ8TBZ2 947 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 FMO2Q99518 471 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 CD248Q9HCU0 757 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 DAAM1Q9Y4D1 1078 aa16.65■□□□□ 0.26
USP43-202ENST00000570475 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 CPXCR1Q8N123 301 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 MSL3Q8N5Y2 521 aaKnown RBP16.64■□□□□ 0.25
USP43-202ENST00000570475 SLC35G2Q8TBE7 412 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 DYDC2Q96IM9 177 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 UBE2TQ9NPD8 197 aaPredicted RBP16.64■□□□□ 0.25
USP43-202ENST00000570475 PNMA2Q9UL42 364 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
USP43-202ENST00000570475 TMEM119Q4V9L6 283 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 PPM1KQ8N3J5 372 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 PBKQ96KB5 322 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
USP43-202ENST00000570475 MYH3P11055 1940 aa16.64■□□□□ 0.25
USP43-202ENST00000570475 DCDC2CA8MYV0 355 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 F5H6K3 240 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 PJA2O43164 708 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 USP11P51784 963 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 KLRC3Q07444 240 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 DENND2CQ68D51 928 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 TPCN2Q8NHX9 752 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 NEUROG2Q9H2A3 272 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 SPATA31A5Q5VU36 1347 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 SPATA31A7Q8IWB4 1347 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 ESYT2A0FGR8 921 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 ARHGEF35A5YM69 484 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 RGS16O15492 202 aaPredicted RBP16.63■□□□□ 0.25
USP43-202ENST00000570475 GH2P01242 217 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 DR1Q01658 176 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 GIT2Q14161 759 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 LRRC14Q15048 493 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 FAM133BQ5BKY9 247 aaKnown RBP16.63■□□□□ 0.25
USP43-202ENST00000570475 ARSHQ5FYA8 562 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 PPP4R3AQ6IN85 833 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 SYCE1Q8N0S2 351 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 IQCKQ8N0W5 287 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 CAVIN3Q969G5 261 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 INPP4AQ96PE3 977 aaPredicted RBP16.63■□□□□ 0.25
USP43-202ENST00000570475 EDEM3Q9BZQ6 932 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 COL4A1P02462 1669 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 GMNCA6NCL1 334 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 GCLMP48507 274 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 ZNF662Q6ZS27 426 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 BANK1Q8NDB2 785 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 GDF3Q9NR23 364 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 GRIN2DO15399 1336 aa16.63■□□□□ 0.25
USP43-202ENST00000570475 PSMC2P35998 433 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms