RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CLIP1P30622 1438 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 NOTOA8MTQ0 251 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA12O60330 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 H2AFYO75367 372 aaKnown RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 RFPL1O75677 317 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 CT47B1P0C2W7 299 aaPredicted RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 MSL3P1P0C860 447 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 RBP3P10745 1247 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PI3P19957 117 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 LSP1P33241 339 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 AFF3P51826 1226 aaKnown RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 ERVFRD-1P60508 538 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 MVKQ03426 396 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 TCIRG1Q13488 830 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 LRRC32Q14392 662 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 TMEM132BQ14DG7 1078 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 HSF5Q4G112 596 aaPredicted RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 MROH9Q5TGP6 573 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 TPH2Q8IWU9 490 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 SIRT2Q8IXJ6 389 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 TCEAL8Q8IYN2 117 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 ZNF610Q8N9Z0 462 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 C1orf162Q8NEQ5 155 aaPredicted RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 DLG3Q92796 817 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 TEPSINQ96N21 525 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 SLC13A1Q9BZW2 595 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCIF1Q9H4Z3 704 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 SLC6A20Q9NP91 592 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 MKS1Q9NXB0 559 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 CNOT11Q9UKZ1 510 aaKnown RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 SRPK3Q9UPE1 567 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 ZNF652Q9Y2D9 606 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA9Q9Y5G4 932 aaKnown RBP4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA8Q9Y5G5 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA7Q9Y5G6 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA6Q9Y5G7 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA3Q9Y5H0 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 PCDHGA2Q9Y5H1 932 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 B3GALT1Q9Y5Z6 326 aa4.83□□□□□ -1.64
UBR1-211ENST00000569971 ADAMTS20P59510 1910 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 KRIT1O00522 736 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 HIP1RO75146 1068 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 CAND2O75155 1236 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 CFBP00751 764 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 NTRK1P04629 796 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 CELA3BP08861 270 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 PRKCAP17252 672 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 GPR3P46089 330 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 PHC1P78364 1004 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 SRSF3P84103 164 aaKnown RBP4.82□□□□□ -1.64
UBR1-211ENST00000569971 PDCD1Q15116 288 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 NXNQ6DKJ4 435 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 PNMA8AQ86V59 439 aaPredicted RBP4.82□□□□□ -1.64
UBR1-211ENST00000569971 RIOX2Q8IUF8 465 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 CPA6Q8N4T0 437 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 MAGEB6Q8N7X4 407 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 NUP43Q8NFH3 380 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 PLCD4Q9BRC7 762 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 ZDHHC5Q9C0B5 715 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 ZMAT4Q9H898 229 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 PDLIM7Q9NR12 457 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 ACSS2Q9NR19 701 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 ANKRD6Q9Y2G4 727 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 ATP23Q9Y6H3 246 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 CUX1P39880 1505 aa4.82□□□□□ -1.64
UBR1-211ENST00000569971 KIF27Q86VH2 1401 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 VPS8Q8N3P4 1428 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 ZC3H12DA2A288 527 aaKnown RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 GOLGA6CA6NDK9 693 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 GOLGA6BA6NDN3 693 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 FAM90A27PA6NNH2 459 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 SLC27A2O14975 620 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 CLASP2O75122 1294 aaKnown RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 LTFP02788 710 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 KRT18P05783 430 aaKnown RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 ADRB1P08588 477 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 GOLGA6DP0CG33 693 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 PF4V1P10720 104 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 RECQLP46063 649 aaPredicted RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 CORO7P57737 925 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 NR1I3Q14994 352 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 CLUL1Q15846 466 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 RGL3Q3MIN7 710 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 STEAP3Q658P3 488 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 ESRP1Q6NXG1 681 aaKnown RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 CC2D1AQ6P1N0 951 aaPredicted RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 CERS3Q8IU89 383 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 NLGN4XQ8N0W4 816 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 UHMK1Q8TAS1 419 aaKnown RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 TGFBRAP1Q8WUH2 860 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 LMBR1Q8WVP7 490 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 PMM1Q92871 262 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 ZNF496Q96IT1 587 aaPredicted RBP4.81□□□□□ -1.64
UBR1-211ENST00000569971 SGPP1Q9BX95 441 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 ARNT2Q9HBZ2 717 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 TCF7L1Q9HCS4 588 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 KCNH7Q9NS40 1196 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 GOLGA6AQ9NYA3 693 aa4.81□□□□□ -1.64
UBR1-211ENST00000569971 DBR1Q9UK59 544 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms