RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 C1QTNF9BB2RNN3 333 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 RNF225M0QZC1 329 aaPredicted RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 DHX15O43143 795 aaKnown RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 CLEC3AO75596 197 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 SLITRK5O94991 958 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 PMS1P54277 932 aaKnown RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 CHAF1AQ13111 956 aaPredicted RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 RASGRF1Q13972 1273 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 MRM1Q6IN84 353 aaKnown RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 KIAA1211LQ6NV74 962 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 LETMD1Q6P1Q0 360 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 GADL1Q6ZQY3 521 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 G2E3Q7L622 706 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 PRRT2Q7Z6L0 340 aaPredicted RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 JAZF1Q86VZ6 243 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 RIN3Q8TB24 985 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 KLHL6Q8WZ60 621 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 DNAJC7Q99615 494 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 SUCOQ9UBS9 1254 aaKnown RBP7.42□□□□□ -1.22
UBFD1-209ENST00000569919 CEP131Q9UPN4 1083 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 AFG3L2Q9Y4W6 797 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 ZHX2Q9Y6X8 837 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 MGAMO43451 1857 aa7.42□□□□□ -1.22
UBFD1-209ENST00000569919 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 RANBP2P49792 3224 aaKnown RBP7.41□□□□□ -1.22
UBFD1-209ENST00000569919 IFRD2Q12894 506 aaPredicted RBP7.41□□□□□ -1.22
UBFD1-209ENST00000569919 CDK5R2Q13319 367 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 BBS9Q3SYG4 887 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 BEND4Q6ZU67 534 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 CDH24Q86UP0 819 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 PPFIBP1Q86W92 1011 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 SCYL3Q8IZE3 742 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 ANKRD13CQ8N6S4 541 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 DNAJB8Q8NHS0 232 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 MAFAQ8NHW3 353 aaPredicted RBP7.41□□□□□ -1.22
UBFD1-209ENST00000569919 LBHD1Q9BQE6 289 aaPredicted RBP7.41□□□□□ -1.22
UBFD1-209ENST00000569919 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 FAM86C1Q9NVL1 165 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 MRPL42Q9Y6G3 142 aaKnown RBP7.41□□□□□ -1.22
UBFD1-209ENST00000569919 MROH5Q6ZUA9 1318 aa7.41□□□□□ -1.22
UBFD1-209ENST00000569919 C9IYK1 514 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 APAF1O14727 1248 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 CTNND1O60716 968 aaKnown RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 TP53P04637 393 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 GCLCP48506 637 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 TCP10Q12799 353 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 TWISTNBQ3B726 338 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 MTERF2Q49AM1 385 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 TDRD10Q5VZ19 366 aaKnown RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 PAOXQ6QHF9 649 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 EEPD1Q7L9B9 569 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 CLEC10AQ8IUN9 316 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 WDR66Q8TBY9 1149 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 ZNF512BQ96KM6 892 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 CDX2Q99626 313 aaPredicted RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 SEMA6BQ9H3T3 888 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 GJD2Q9UKL4 321 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 AGTPBP1Q9UPW5 1226 aa7.4□□□□□ -1.22
UBFD1-209ENST00000569919 MYBBP1AQ9BQG0 1328 aaKnown RBP7.4□□□□□ -1.22
UBFD1-209ENST00000569919 ALPK3Q96L96 1907 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 COL6A1P12109 1028 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 ZEB1P37275 1124 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 PABPC4Q13310 644 aaKnown RBP eCLIP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 BEND3Q5T5X7 828 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 CDC42EP5Q6NZY7 148 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 LILRB2Q8N423 598 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 TOP6BLQ8N6T0 577 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 ST13P5Q8NFI4 369 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 KREMEN1Q96MU8 473 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 FAM83CQ9BQN1 747 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 PUS3Q9BZE2 481 aaKnown RBP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 USP40Q9NVE5 1235 aa7.39□□□□□ -1.23
UBFD1-209ENST00000569919 C9orf78Q9NZ63 289 aaPredicted RBP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
UBFD1-209ENST00000569919 PFASO15067 1338 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 GRM8O00222 908 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 ENTPD3O75355 529 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 PDE8BO95263 885 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
UBFD1-209ENST00000569919 ETV3P41162 512 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 GATA4P43694 442 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 LRRC26Q2I0M4 334 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 EPHA10Q5JZY3 1008 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 AXDND1Q5T1B0 1012 aaPredicted RBP7.38□□□□□ -1.23
UBFD1-209ENST00000569919 MAP3K21Q5TCX8 1036 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 SDE2Q6IQ49 451 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 SPATC1Q76KD6 591 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 VWCEQ96DN2 955 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 RNPC3Q96LT9 517 aaKnown RBP7.38□□□□□ -1.23
UBFD1-209ENST00000569919 DUSP23Q9BVJ7 150 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 STK17AQ9UEE5 414 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 AK9Q5TCS8 1911 aa7.38□□□□□ -1.23
UBFD1-209ENST00000569919 DOCK3Q8IZD9 2030 aa7.37□□□□□ -1.23
UBFD1-209ENST00000569919 HMX2A2RU54 273 aa7.37□□□□□ -1.23
UBFD1-209ENST00000569919 TRIM75PA6NK02 468 aa7.37□□□□□ -1.23
UBFD1-209ENST00000569919 SUSD5O60279 629 aa7.37□□□□□ -1.23
UBFD1-209ENST00000569919 LEFTY1O75610 366 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms