RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 RBAK-RBAKDNI3L0D1 243 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 IPO5O00410 1097 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ATP2A1O14983 1001 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 NKRFO15226 690 aaKnown RBP eCLIP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SLC16A3O15427 465 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PJA2O43164 708 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ATP8B1O43520 1251 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 CALUO43852 315 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 GAS7O60861 476 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TADA3O75528 432 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 NOL4O94818 638 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 EGFRP00533 1210 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 P4HBP07237 508 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 NUDT7P0C024 238 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 H2AFXP16104 143 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ITGB5P18084 799 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 BACE1P56817 501 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SNRPFP62306 86 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 HERVK_113P62684 666 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PABPC4Q13310 644 aaKnown RBP eCLIP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ASTE1Q2TB18 679 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TKFCQ3LXA3 575 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ARHGAP29Q52LW3 1261 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF569Q5MCW4 686 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PCNX4Q63HM2 1172 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF720Q7Z2F6 126 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SAMD7Q7Z3H4 446 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 APOBEC3FQ8IUX4 373 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SCYL3Q8IZE3 742 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 GPC2Q8N158 579 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 RDH13Q8NBN7 331 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 EHBP1Q8NDI1 1231 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ACRBPQ8NEB7 543 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 RDM1Q8NG50 284 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SLC39A7Q92504 469 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 BAP1Q92560 729 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 UBXN4Q92575 508 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 RABGGTAQ92696 567 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 KHSRPQ92945 711 aaKnown RBP eCLIP5.93□□□□□ -1.463e-6■■■■□ 22.5
SF3B3-213ENST00000569687 BORCS6Q96GS4 357 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 DYDC2Q96IM9 177 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PURBQ96QR8 312 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 SENP7Q9BQF6 1050 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 REEP2Q9BRK0 252 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ZNF577Q9BSK1 485 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 MKNK1Q9BUB5 465 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 RUSC1Q9BVN2 902 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TIPINQ9BVW5 301 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 CCDC94Q9BW85 323 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TEKT3Q9BXF9 490 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 FGFBP2Q9BYJ0 223 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 IRX2Q9BZI1 471 aaPredicted RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 BHMT2Q9H2M3 363 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 UNC45AQ9H3U1 944 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TMEM134Q9H6X4 195 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 VRTNQ9H8Y1 702 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 AS3MTQ9HBK9 375 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 AGO4Q9HCK5 861 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PLCB1Q9NQ66 1216 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 KCNH7Q9NS40 1196 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TBC1D22BQ9NU19 505 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 TYW1Q9NV66 732 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 DMAC2Q9NW81 257 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 FAM53CQ9NYF3 392 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 AIPL1Q9NZN9 384 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 HACL1Q9UJ83 578 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 FBXL5Q9UKA1 691 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 ODF2LQ9ULJ1 636 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 PPP2R3BQ9Y5P8 575 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 GJA3Q9Y6H8 435 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 DICER1Q9UPY3 1922 aaKnown RBP5.93□□□□□ -1.46
SF3B3-213ENST00000569687 UBE4BO95155 1302 aa5.93□□□□□ -1.46
SF3B3-213ENST00000569687 GTPBP10A4D1E9 387 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TMEM88BA6NKF7 163 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 VWA5AO00534 786 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PES1O00541 588 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TGFB1I1O43294 461 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 KRT86O43790 486 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TUBBP07437 444 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PRLRP16471 622 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 TAL1P17542 331 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 PTPRAP18433 802 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ANXA13P27216 316 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 KLK7P49862 253 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CASP5P51878 434 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 MRPS9P82933 396 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 AMPD2Q01433 879 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SPP2Q13103 211 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ALCAMQ13740 583 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CTTNQ14247 550 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 COG2Q14746 738 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 NAA30Q147X3 362 aaPredicted RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SPA17Q15506 151 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 WHAMMP3Q1A5X7 153 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 ERCC6LQ2NKX8 1250 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 SUPT20HL1Q3ZLR7 823 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 CCDC40Q4G0X9 1142 aa5.92□□□□□ -1.46
SF3B3-213ENST00000569687 NOL9Q5SY16 702 aaKnown RBP5.92□□□□□ -1.46
SF3B3-213ENST00000569687 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms