RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 PSMC5P62195 406 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 FSCN1Q16658 493 aaKnown RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 DGKDQ16760 1214 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 BRDTQ58F21 947 aaPredicted RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 LHX8Q68G74 356 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 TRIM50Q86XT4 487 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 FMR1NBQ8N0W7 255 aaPredicted RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 RASSF8Q8NHQ8 419 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 CDK5RAP3Q96JB5 506 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 PNMA5Q96PV4 448 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 PCYT2Q99447 389 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 UNC93B1Q9H1C4 597 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 ZSWIM4Q9H7M6 989 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 ZNF302Q9NR11 478 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 WRAP73Q9P2S5 460 aaPredicted RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 GABBR1Q9UBS5 961 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 STK17AQ9UEE5 414 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 CCDC39Q9UFE4 941 aa11.68□□□□□ -0.54
CDH3-210ENST00000569117 MAFBQ9Y5Q3 323 aaPredicted RBP11.68□□□□□ -0.54
CDH3-210ENST00000569117 MYADML2A6NDP7 307 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 POM121CA8CG34 1229 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 BACH1O14867 736 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 ZNF862O60290 1169 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 PPFIA4O75335 1185 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 PGK1P00558 417 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 F2P00734 622 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
CDH3-210ENST00000569117 CCL5P13501 91 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 LIG1P18858 919 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 STAT6P42226 847 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 SYKP43405 635 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 PRKCEQ02156 737 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 CTTNQ14247 550 aaKnown RBP11.67□□□□□ -0.54
CDH3-210ENST00000569117 NFKBIBQ15653 356 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 ECM1Q16610 540 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 SWSAP1Q6NVH7 229 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 PLPPR4Q7Z2D5 763 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 C4orf19Q8IY42 314 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 PDILTQ8N807 584 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 KLHDC9Q8NEP7 349 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 ENGASEQ8NFI3 743 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 LRRC15Q8TF66 581 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 GLMNQ92990 594 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 FAM167AQ96KS9 214 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 DCBLD2Q96PD2 775 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 C16orf70Q9BSU1 422 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 ADAM33Q9BZ11 813 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 CUEDC2Q9H467 287 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 AZI2Q9H6S1 392 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 DDX19AQ9NUU7 478 aaKnown RBP11.67□□□□□ -0.54
CDH3-210ENST00000569117 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
CDH3-210ENST00000569117 ZNF215Q9UL58 517 aaPredicted RBP11.67□□□□□ -0.54
CDH3-210ENST00000569117 BRCA2P51587 3418 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 MOXD2PA6NHM9 499 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 POLR2DO15514 142 aaKnown RBP11.66□□□□□ -0.54
CDH3-210ENST00000569117 KPNA6O60684 536 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 AP1G2O75843 785 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 ZNF286BP0CG31 522 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 STAT5BP51692 787 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 BEX3Q00994 111 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 SNW1Q13573 536 aaKnown RBP11.66□□□□□ -0.54
CDH3-210ENST00000569117 MTFR1Q15390 333 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 ZRSR1Q15695 479 aaKnown RBP11.66□□□□□ -0.54
CDH3-210ENST00000569117 QPCTQ16769 361 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 RRAGBQ5VZM2 374 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 CCSAPQ6IQ19 270 aaPredicted RBP11.66□□□□□ -0.54
CDH3-210ENST00000569117 PDXDC2PQ6P474 469 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 KCNK18Q7Z418 384 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 RNF180Q86T96 592 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 TPH2Q8IWU9 490 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 IQUBQ8NA54 791 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 GPT2Q8TD30 523 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 GLG1Q92896 1179 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 DHX58Q96C10 678 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 GZF1Q9H116 711 aaPredicted RBP11.66□□□□□ -0.54
CDH3-210ENST00000569117 SMARCAD1Q9H4L7 1026 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 MAGEF1Q9HAY2 307 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 ERAP1Q9NZ08 941 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 KIAA1024Q9UPX6 916 aa11.66□□□□□ -0.54
CDH3-210ENST00000569117 ACTN4O43707 911 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 NR1I2O75469 434 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 ZNF202O95125 648 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 STBD1O95210 358 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 SLFN14P0C7P3 912 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 XRCC6P12956 609 aaKnown RBP eCLIP11.65□□□□□ -0.54
CDH3-210ENST00000569117 ATP4AP20648 1035 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 YWHABP31946 246 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 PURAQ00577 322 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 LRRC41Q15345 812 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 XKR3Q5GH77 459 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 UTP14CQ5TAP6 766 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 PCSK9Q8NBP7 692 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 ATP8B4Q8TF62 1192 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 RAD54LQ92698 747 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms