RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 RAPGEF2Q9Y4G8 1499 aa4.81□□□□□ -1.64
HMGB1P6-201ENST00000569046 ABCA9Q8IUA7 1624 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 SPATA31D1Q6ZQQ2 1576 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 B4E1Z4 1266 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 DVL2O14641 736 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 KRT37O76014 449 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 KLHL18O94889 574 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 APPP05067 770 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 CTSWP56202 376 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 GJA9P57773 515 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 IRF9Q00978 393 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 FAM26FQ5R3K3 315 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 CDCA2Q69YH5 1023 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 PKN3Q6P5Z2 889 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 LILRA6Q6PI73 481 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 FRMD5Q7Z6J6 570 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 FERMT3Q86UX7 667 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 DHX37Q8IY37 1157 aaKnown RBP4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 CHST14Q8NCH0 376 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 NINJ1Q92982 152 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 MBD6Q96DN6 1003 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 WRNIP1Q96S55 665 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 AMNQ9BXJ7 453 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 MTFR1LQ9H019 292 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 L2HGDHQ9H9P8 463 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 KCNH7Q9NS40 1196 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 ATP10BO94823 1461 aa4.8□□□□□ -1.64
HMGB1P6-201ENST00000569046 MROH6A6NGR9 719 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 CBX4O00257 560 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 PTGS1P23219 599 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 HERVK_113P62684 666 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 TMEM132BQ14DG7 1078 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 SMAD2Q15796 467 aaKnown RBP4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 DALRD3Q5D0E6 543 aaKnown RBP4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 CATSPEREQ5SY80 951 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 LRSAM1Q6UWE0 723 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 KIAA0907Q7Z7F0 614 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 ASB15Q8WXK1 588 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 WNK4Q96J92 1243 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 BOCQ9BWV1 1114 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 USP40Q9NVE5 1235 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 INTS7Q9NVH2 962 aaKnown RBP4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 UCKL1Q9NWZ5 548 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 ARHGAP28Q9P2N2 729 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 MAGEC2Q9UBF1 373 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 PREX1Q8TCU6 1659 aa4.79□□□□□ -1.64
HMGB1P6-201ENST00000569046 PTPDC1A2A3K4 754 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 C9orf118A6NHY6 69 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 ENPP3O14638 875 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 B4GALT3O60512 393 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 KPNA6O60684 536 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CYP7B1O75881 506 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 FBXO21O94952 628 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CYP1A1P04798 512 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 SDHAP31040 664 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CNR2P34972 360 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 IL13RA1P78552 427 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 NFIXQ14938 502 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 SKOR2Q2VWA4 1001 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CFAP100Q494V2 611 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CREB3L3Q68CJ9 461 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 CNNM4Q6P4Q7 775 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 LRRTM3Q86VH5 581 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 NIM1KQ8IY84 436 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 LCORQ96JN0 433 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 TEPSINQ96N21 525 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 GBP4Q96PP9 640 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 FEZ1Q99689 392 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 TMEM168Q9H0V1 697 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 INCENPQ9NQS7 918 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 GALNT8Q9NY28 637 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 B4GALT6Q9UBX8 382 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 FTSJ1Q9UET6 329 aa4.78□□□□□ -1.64
HMGB1P6-201ENST00000569046 RAPGEF6Q8TEU7 1601 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 TLDC2A0PJX2 215 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 PRAMEF22A3QJZ6 481 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 FOXP2O15409 715 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 CHGBP05060 677 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 POU3F2P20265 443 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 KIF11P52732 1056 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 NFATC3Q12968 1075 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 PCBP1Q15365 356 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 PLEKHG4Q58EX7 1191 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZFYVE27Q5T4F4 411 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 FOXRED1Q96CU9 486 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 TARS2Q9BW92 718 aaKnown RBP4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 INVSQ9Y283 1065 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 YEATS2Q9ULM3 1422 aa4.77□□□□□ -1.65
HMGB1P6-201ENST00000569046 HECW1Q76N89 1606 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZNF891A8MT65 544 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 H0Y858 1186 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 GOLGA6L22H0YM25 854 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 FOXD2O60548 495 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 HIP1RO75146 1068 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 PTX3P26022 381 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 FLT3P36888 993 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 NEK4P51957 841 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms