RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 SPEM2Q0P670 501 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 LRSAM1Q6UWE0 723 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 UNQ6494/PRO21346Q6UXR6 183 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 GPR152Q8TDT2 470 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 APPBP2Q92624 585 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 FRAT1Q92837 279 aaPredicted RBP13.09□□□□□ -0.31
CDH3-208ENST00000569036 SPATA6Q9NWH7 488 aaPredicted RBP13.09□□□□□ -0.31
CDH3-208ENST00000569036 ZSCAN32Q9NX65 697 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 SQORQ9Y6N5 450 aa13.09□□□□□ -0.31
CDH3-208ENST00000569036 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 N4BP1O75113 896 aaKnown RBP13.08□□□□□ -0.32
CDH3-208ENST00000569036 TGFB3P10600 412 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 HSPD1P10809 573 aaKnown RBP13.08□□□□□ -0.32
CDH3-208ENST00000569036 PDE4AP27815 886 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 PBX3P40426 434 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 PAK2Q13177 524 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 HSP90AB4PQ58FF6 505 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 MCF2L2Q86YR7 1114 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 DDX1Q92499 740 aaKnown RBP13.08□□□□□ -0.32
CDH3-208ENST00000569036 NELL1Q92832 810 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 TMEM47Q9BQJ4 181 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 PDCD2LQ9BRP1 358 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 TUBE1Q9UJT0 475 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 NAV2Q8IVL1 2488 aa13.08□□□□□ -0.32
CDH3-208ENST00000569036 RALGAPA1Q6GYQ0 2036 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 MBLAC1A4D2B0 266 aaPredicted RBP13.07□□□□□ -0.32
CDH3-208ENST00000569036 PATL2C9JE40 543 aaKnown RBP13.07□□□□□ -0.32
CDH3-208ENST00000569036 M0R2C6 588 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 MGEA5O60502 916 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
CDH3-208ENST00000569036 PPM1AP35813 382 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 NONOQ15233 471 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDH3-208ENST00000569036 UTP14CQ5TAP6 766 aaKnown RBP13.07□□□□□ -0.32
CDH3-208ENST00000569036 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 GPR149Q86SP6 731 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 KDF1Q8NAX2 398 aaPredicted RBP13.07□□□□□ -0.32
CDH3-208ENST00000569036 IL31RAQ8NI17 732 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 KIF1BPQ96EK5 621 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 CPVLQ9H3G5 476 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 LHX6Q9UPM6 363 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 TELO2Q9Y4R8 837 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 COL4A3Q01955 1670 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 IGSF9BQ9UPX0 1349 aa13.07□□□□□ -0.32
CDH3-208ENST00000569036 RANBP6O60518 1105 aaKnown RBP13.06□□□□□ -0.32
CDH3-208ENST00000569036 CA8P35219 290 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 KRT17Q04695 432 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 RING1Q06587 406 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 PPFIA1Q13136 1202 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 CDC37Q16543 378 aaPredicted RBP13.06□□□□□ -0.32
CDH3-208ENST00000569036 DCLRE1AQ6PJP8 1040 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 METTL7BQ6UX53 244 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 VSIG10LQ86VR7 867 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 ZFP91Q96JP5 570 aaPredicted RBP13.06□□□□□ -0.32
CDH3-208ENST00000569036 ZNF558Q96NG5 402 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 NACAP1Q9BZK3 213 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 SFXN1Q9H9B4 322 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 TRPV2Q9Y5S1 764 aa13.06□□□□□ -0.32
CDH3-208ENST00000569036 AKAP13Q12802 2813 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 LAMA4Q16363 1823 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 GDF9O60383 454 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 SNHG28P0DPA3 235 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 FGFR1P11362 822 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 HSD17B4P51659 736 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 PGM5Q15124 567 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 GRIK4Q16099 956 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 TMEM266Q2M3C6 531 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 MARCH8Q5T0T0 291 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 LRRC55Q6ZSA7 311 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 CABP7Q86V35 215 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 SLC22A17Q8WUG5 538 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 ZBTB10Q96DT7 871 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 BCO2Q9BYV7 579 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
CDH3-208ENST00000569036 NAPBQ9H115 298 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 SPG21Q9NZD8 308 aa13.05□□□□□ -0.32
CDH3-208ENST00000569036 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.04□□□□□ -0.32
CDH3-208ENST00000569036 TAF4O00268 1085 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 OPLAHO14841 1288 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 LRP3O75074 770 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 CFBP00751 764 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 STARD6P59095 220 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 LPAL2Q16609 132 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 IER5Q5VY09 327 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 PRR23CQ6ZRP0 262 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 CYFIP1Q7L576 1253 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 GLG1Q92896 1179 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
CDH3-208ENST00000569036 MRPL11Q9Y3B7 192 aaKnown RBP13.04□□□□□ -0.32
CDH3-208ENST00000569036 UNC79Q9P2D8 2635 aa13.03□□□□□ -0.32
CDH3-208ENST00000569036 SRRM3A6NNA2 597 aaPredicted RBP13.03□□□□□ -0.32
CDH3-208ENST00000569036 C9IYK1 514 aa13.03□□□□□ -0.32
CDH3-208ENST00000569036 M0QZ92 97 aa13.03□□□□□ -0.32
CDH3-208ENST00000569036 RNF113AO15541 343 aaKnown RBP13.03□□□□□ -0.32
CDH3-208ENST00000569036 CXCL14O95715 111 aa13.03□□□□□ -0.32
CDH3-208ENST00000569036 GOLGA8HP0CJ92 632 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms