RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 PPP1R12CQ9BZL4 782 aa18.63■□□□□ 0.57
CNEP1R1-210ENST00000568890 TUFT1Q9NNX1 390 aa18.63■□□□□ 0.57
CNEP1R1-210ENST00000568890 SEPT9Q9UHD8 586 aaPredicted RBP18.63■□□□□ 0.57
CNEP1R1-210ENST00000568890 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
CNEP1R1-210ENST00000568890 C22orf31O95567 290 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 YEATS4O95619 227 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 DRP2Q13474 957 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 STK38Q15208 465 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 MTERF2Q49AM1 385 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 ZNF484Q5JVG2 852 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 TRAF7Q6Q0C0 670 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 SNX29Q8TEQ0 813 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 WNT8AQ9H1J5 351 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 GDPD2Q9HCC8 539 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 TLR3O15455 904 aaKnown RBP18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 GNAT1P11488 350 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 PTK7Q13308 1070 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 GRB10Q13322 594 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 ATL3Q6DD88 541 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 DNAJB3Q8WWF6 145 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 FAM167AQ96KS9 214 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 HIPK3Q9H422 1215 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 CYP26B1Q9NR63 512 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 PCDHA7Q9UN72 937 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 NOD1Q9Y239 953 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 WDR81Q562E7 1941 aa18.62■□□□□ 0.57
CNEP1R1-210ENST00000568890 PPP6R2O75170 966 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 TIMP1P01033 207 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 LONP1P36776 959 aaKnown RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 CCL23P55773 120 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 KIAA0319LQ8IZA0 1049 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 LINC01465Q8N7H1 131 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 KRI1Q8N9T8 703 aaKnown RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 NEK9Q8TD19 979 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 RAB34Q9BZG1 259 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 PCDHA2Q9Y5H9 948 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 CKBP12277 381 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 RARRES1P49788 294 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 KRT79Q5XKE5 535 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 LRRC71Q8N4P6 559 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 BADQ92934 168 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 SCLYQ96I15 445 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 CEP170P1Q96L14 293 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 AK8Q96MA6 479 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 DDX19AQ9NUU7 478 aaKnown RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 CIZ1Q9ULV3 898 aaPredicted RBP18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 NR2E3Q9Y5X4 410 aa18.61■□□□□ 0.57
CNEP1R1-210ENST00000568890 MYH9P35579 1960 aaKnown RBP18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 IGKV6-21A0A0C4DH24 114 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 E9PMD0 336 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 MBTPS1Q14703 1052 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 HYIQ5T013 277 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 ZNF618Q5T7W0 954 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 ERMNQ8TAM6 284 aa18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 BMP2KQ9NSY1 1161 aaPredicted RBP18.6■□□□□ 0.57
CNEP1R1-210ENST00000568890 COL1A2P08123 1366 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 A0A087X0B3 334 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 RAG1P15918 1043 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 NCLP19338 710 aaKnown RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 CLCN3P51790 818 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 MDM2Q00987 491 aaPredicted RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 TMEM62Q0P6H9 643 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 XKR9Q5GH70 373 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 HAUS3Q68CZ6 603 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 EFCAB12Q6NXP0 572 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 SHC4Q6S5L8 630 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 METTL13Q8N6R0 699 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 TNPO1Q92973 898 aaKnown RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 NACC1Q96RE7 527 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 PANK2Q9BZ23 570 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 FAM49AQ9H0Q0 323 aaPredicted RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 SUGCTQ9HAC7 445 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 CDHR5Q9HBB8 845 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 POLD4Q9HCU8 107 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 MAFO75444 373 aaPredicted RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 CHRNA1P02708 482 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 XRCC6P12956 609 aaKnown RBP eCLIP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 THPOP40225 353 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 EPHB4P54760 987 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 KRT85P78386 507 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 RBL2Q08999 1139 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 CABP7Q86V35 215 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 DHX33Q9H6R0 707 aaKnown RBP18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 XPNPEP1Q9NQW7 623 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 ANKEF1Q9NU02 776 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 CHMP5Q9NZZ3 219 aa18.59■□□□□ 0.57
CNEP1R1-210ENST00000568890 SMIM35A0A1B0GVV1 85 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 DKC1O60832 514 aaKnown RBP eCLIP18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 IQCF3P0C7M6 154 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 CSF2RAP15509 400 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 UBA7P41226 1012 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 TBC1D8BQ0IIM8 1120 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 C16orf59Q7L2K0 433 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 OTUD6AQ7L8S5 288 aa18.58■□□□□ 0.56
CNEP1R1-210ENST00000568890 CCSER1Q9C0I3 900 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms