RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 PLA2G4FQ68DD2 849 aa18.71■□□□□ 0.59
COMMD4-224ENST00000568877 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
COMMD4-224ENST00000568877 CDK5RAP3Q96JB5 506 aa18.71■□□□□ 0.59
COMMD4-224ENST00000568877 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
COMMD4-224ENST00000568877 NOD1Q9Y239 953 aa18.71■□□□□ 0.59
COMMD4-224ENST00000568877 MBLAC1A4D2B0 266 aaPredicted RBP18.7■□□□□ 0.58
COMMD4-224ENST00000568877 TREHO43280 583 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 KLRC1P26715 233 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 RGS19P49795 217 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 NPEPPSP55786 919 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 FAAP100Q0VG06 881 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 KARSQ15046 597 aaKnown RBP18.7■□□□□ 0.58
COMMD4-224ENST00000568877 ADALQ6DHV7 355 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 SHC4Q6S5L8 630 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 KCTD17Q8N5Z5 321 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 CEP170P1Q96L14 293 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 CTAGE1Q96RT6 745 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 PLIN2Q99541 437 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 SH2D3AQ9BRG2 576 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 CYP26B1Q9NR63 512 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 CCDC39Q9UFE4 941 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 TUBE1Q9UJT0 475 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 DNM3Q9UQ16 869 aa18.7■□□□□ 0.58
COMMD4-224ENST00000568877 RARRES1P49788 294 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 TMEM119Q4V9L6 283 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 XKR9Q5GH70 373 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 MTHFD1LQ6UB35 978 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 ZBTB10Q96DT7 871 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 CEP89Q96ST8 783 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 DBR1Q9UK59 544 aaKnown RBP18.69■□□□□ 0.58
COMMD4-224ENST00000568877 PPME1Q9Y570 386 aa18.69■□□□□ 0.58
COMMD4-224ENST00000568877 WDR81Q562E7 1941 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 MYH9P35579 1960 aaKnown RBP18.68■□□□□ 0.58
COMMD4-224ENST00000568877 E9PMD0 336 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 MAGEB2O15479 319 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 C22orf31O95567 290 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 CLTBP09497 229 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 PLCG1P19174 1290 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 TBC1D8BQ0IIM8 1120 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 PTK7Q13308 1070 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 CSPP1Q1MSJ5 1256 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 RESP18Q5W5W9 173 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 KCNK18Q7Z418 384 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 SERINC5Q86VE9 423 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 DPF3Q92784 378 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 CCDC43Q96MW1 224 aaKnown RBP18.68■□□□□ 0.58
COMMD4-224ENST00000568877 FAM13BQ9NYF5 915 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 PCDHA2Q9Y5H9 948 aa18.68■□□□□ 0.58
COMMD4-224ENST00000568877 EVI5O60447 810 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 EYA4O95677 639 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 CYP2C9P11712 490 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 CMA1P23946 247 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 TAF2Q6P1X5 1199 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 CCDC73Q6ZRK6 1079 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 CLEC17AQ6ZS10 378 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 EXOC8Q8IYI6 725 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 C7orf61Q8IZ16 206 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 PANK2Q9BZ23 570 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 BHMT2Q9H2M3 363 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 TMEM39AQ9NV64 488 aa18.67■□□□□ 0.58
COMMD4-224ENST00000568877 A0A1W2PQ27 194 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 A0A1W2PQ64 194 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 A0A1W2PQD8 194 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 ARHGEF35A5YM69 484 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 MAFO75444 373 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-224ENST00000568877 RFC5P40937 340 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 POLGP54098 1239 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-224ENST00000568877 RRAGBQ5VZM2 374 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 EFCAB12Q6NXP0 572 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 RETREG2Q8NC44 543 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 LRRC15Q8TF66 581 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 SLC7A3Q8WY07 619 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 DHX38Q92620 1227 aaKnown RBP18.66■□□□□ 0.58
COMMD4-224ENST00000568877 JPH2Q9BR39 696 aaPredicted RBP18.66■□□□□ 0.58
COMMD4-224ENST00000568877 DHX33Q9H6R0 707 aaKnown RBP18.66■□□□□ 0.58
COMMD4-224ENST00000568877 PDLIM7Q9NR12 457 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 TBX21Q9UL17 535 aa18.66■□□□□ 0.58
COMMD4-224ENST00000568877 A0A087X0B3 334 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 IGKV6-21A0A0C4DH24 114 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 SMIM35A0A1B0GVV1 85 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 DGAT1O75907 488 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 PLA2G4BP0C869 781 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 SH3RF1Q7Z6J0 888 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 METTL13Q8N6R0 699 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 PDILTQ8N807 584 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 WNT8BQ93098 351 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 SUGCTQ9HAC7 445 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 PRDM5Q9NQX1 630 aaPredicted RBP18.65■□□□□ 0.58
COMMD4-224ENST00000568877 BLOC1S4Q9NUP1 217 aa18.65■□□□□ 0.58
COMMD4-224ENST00000568877 TCHHQ07283 1943 aa18.64■□□□□ 0.58
COMMD4-224ENST00000568877 TRIM43BA6NCK2 446 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 GOLGA6L4A6NEF3 574 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 KIAA0355O15063 1070 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 TMOD1P28289 359 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 BFSP2Q13515 415 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 TRIM71Q2Q1W2 868 aaKnown RBP18.64■□□□□ 0.57
COMMD4-224ENST00000568877 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.57
COMMD4-224ENST00000568877 PADI6Q6TGC4 694 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms