RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 ZNF511Q8NB15 262 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 KIF18AQ8NI77 898 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 HPS3Q969F9 1004 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 PPP1R13BQ96KQ4 1090 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 TRERF1Q96PN7 1200 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 NOC4LQ9BVI4 516 aaKnown RBP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 FHDC1Q9C0D6 1143 aaPredicted RBP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 KCND2Q9NZV8 630 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 FRMPD4Q14CM0 1322 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 UQCRHLA0A096LP55 91 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 USP27XA6NNY8 438 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 TBCAO75347 108 aaKnown RBP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 GYPCP04921 128 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 UQCRHP07919 91 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 GAP43P17677 238 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 CASP14P31944 242 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 UBXN2AP68543 259 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 CYP4A11Q02928 519 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 TBC1D8BQ0IIM8 1120 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 PABPC4Q13310 644 aaKnown RBP eCLIP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 COG2Q14746 738 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 NR6A1Q15406 480 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 TKFCQ3LXA3 575 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 TMTC1Q8IUR5 882 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 ZNF507Q8TCN5 953 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 SYTL5Q8TDW5 730 aaPredicted RBP12.38□□□□□ -0.43
LYRM1-210ENST00000568820 CPLX3Q8WVH0 158 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 CEP63Q96MT8 703 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 NACC1Q96RE7 527 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 HOXC10Q9NYD6 342 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 COL4A3BPQ9Y5P4 624 aa12.38□□□□□ -0.43
LYRM1-210ENST00000568820 EML1O00423 815 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 PPP1R12BO60237 982 aaPredicted RBP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 SLITRK3O94933 977 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 HIRAP54198 1017 aaPredicted RBP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 HMGCS2P54868 508 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 GIT2Q14161 759 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 LINC01559Q495D7 138 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 ARSHQ5FYA8 562 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 TPH2Q8IWU9 490 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 IRX2Q9BZI1 471 aaPredicted RBP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 BHMT2Q9H2M3 363 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 ZHX3Q9H4I2 956 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 JADE2Q9NQC1 790 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 HOMER2Q9NSB8 354 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 TBC1D22BQ9NU19 505 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 TCEAL9Q9UHQ7 104 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
LYRM1-210ENST00000568820 UBIAD1Q9Y5Z9 338 aa12.37□□□□□ -0.43
LYRM1-210ENST00000568820 DICER1Q9UPY3 1922 aaKnown RBP12.36□□□□□ -0.43
LYRM1-210ENST00000568820 B4DLN1 442 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 DYNC1I1O14576 645 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 CHMP2AO43633 222 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 CCDC175P0C221 793 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ARP10275 920 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 GTF2F1P35269 517 aaKnown RBP eCLIP12.36□□□□□ -0.431e-6■■□□□ 14.1
LYRM1-210ENST00000568820 GOLGA8FQ08AF8 430 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 GOLGA8DPQ0D2H9 430 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 MTMR1Q13613 665 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 MAN2A1Q16706 1144 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 EDRF1Q3B7T1 1238 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 MUM1L1Q5H9M0 696 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 PRAMEF18Q5VWM3 479 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 CYP26C1Q6V0L0 522 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 CATSPERGQ6ZRH7 1159 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 DYDC2Q96IM9 177 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 KCNH7Q9NS40 1196 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 RNF146Q9NTX7 359 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 RGL1Q9NZL6 768 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 RNF181Q9P0P0 153 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ADAMTS5Q9UNA0 930 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 PPP2R2CQ9Y2T4 447 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 PCDHA2Q9Y5H9 948 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 CSADQ9Y600 493 aa12.36□□□□□ -0.43
LYRM1-210ENST00000568820 ZC3H4Q9UPT8 1303 aaKnown RBP12.36□□□□□ -0.43
LYRM1-210ENST00000568820 TRAF5O00463 557 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 MAFGO15525 162 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
LYRM1-210ENST00000568820 ITGB5P18084 799 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 TRIM21P19474 475 aaKnown RBP12.35□□□□□ -0.43
LYRM1-210ENST00000568820 KRT9P35527 623 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 FXR1P51114 621 aaKnown RBP eCLIP12.35□□□□□ -0.43
LYRM1-210ENST00000568820 PSMC6P62333 389 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 DGKZQ13574 1117 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 CTTNQ14247 550 aaKnown RBP12.35□□□□□ -0.43
LYRM1-210ENST00000568820 LRRC41Q15345 812 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 VWA3BQ502W6 1294 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 FIGNQ5HY92 759 aa12.35□□□□□ -0.43
LYRM1-210ENST00000568820 ARHGEF16Q5VV41 709 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms