RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 COL13A1Q5TAT6 717 aaPredicted RBP8.57□□□□□ -1.04
SCAPER-221ENST00000568549 PLA2G4FQ68DD2 849 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 ANO5Q75V66 913 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 KCNK18Q7Z418 384 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 CEP57L1Q8IYX8 460 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 FMR1NBQ8N0W7 255 aaPredicted RBP8.57□□□□□ -1.04
SCAPER-221ENST00000568549 ANKLE1Q8NAG6 615 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 ATP8B4Q8TF62 1192 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 LRRC15Q8TF66 581 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 LARP4BQ92615 738 aaKnown RBP8.57□□□□□ -1.04
SCAPER-221ENST00000568549 RAD54LQ92698 747 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 VTI1AQ96AJ9 217 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 GLT1D1Q96MS3 346 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 CUEDC2Q9H467 287 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 RNPEPQ9H4A4 650 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 ANKEF1Q9NU02 776 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 BLOC1S4Q9NUP1 217 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 USP25Q9UHP3 1055 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 DBR1Q9UK59 544 aaKnown RBP8.57□□□□□ -1.04
SCAPER-221ENST00000568549 COL1A2P08123 1366 aa8.57□□□□□ -1.04
SCAPER-221ENST00000568549 KIAA0100Q14667 2235 aaKnown RBP8.57□□□□□ -1.04
SCAPER-221ENST00000568549 ACTN4O43707 911 aaKnown RBP8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NR1I2O75469 434 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 ZNF202O95125 648 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SSBP05455 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
SCAPER-221ENST00000568549 PLA2G4BP0C869 781 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SMIM10L2AP0DMW4 78 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SMIM10L2BP0DMW5 78 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 INSRRP14616 1297 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 RARRES1P49788 294 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NPEPPSP55786 919 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 IGBP1P78318 339 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 PPFIA1Q13136 1202 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SNW1Q13573 536 aaKnown RBP8.56□□□□□ -1.04
SCAPER-221ENST00000568549 DHX8Q14562 1220 aaKnown RBP8.56□□□□□ -1.04
SCAPER-221ENST00000568549 MCM6Q14566 821 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NBPF20Q3BBV1 942 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 LONRF3Q496Y0 759 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NAALADL2Q58DX5 795 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 FAM47CQ5HY64 1035 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 ZNF484Q5JVG2 852 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 C7orf31Q8N865 590 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 CNNM3Q8NE01 707 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 ENGASEQ8NFI3 743 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 PPP1R13LQ8WUF5 828 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 CEP170P1Q96L14 293 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SH2D3AQ9BRG2 576 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NIFKQ9BYG3 293 aaKnown RBP8.56□□□□□ -1.04
SCAPER-221ENST00000568549 BHMT2Q9H2M3 363 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 MAGEF1Q9HAY2 307 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 STARD7Q9NQZ5 370 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 CYP26B1Q9NR63 512 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 SERTAD1Q9UHV2 236 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 PPME1Q9Y570 386 aa8.56□□□□□ -1.04
SCAPER-221ENST00000568549 NRCAMQ92823 1304 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 A0A0U1RQG5 324 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 C17orf102A2RUQ5 167 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 RRN3P2A6NIE6 340 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 ZBTB42B2RXF5 422 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 USO1O60763 962 aaKnown RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 KINO60870 393 aaKnown RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 MBD3O95983 291 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 RFC5P40937 340 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 MNX1P50219 401 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 POLGP54098 1239 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SLC12A3P55017 1021 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 ITGA7Q13683 1181 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 TARBP2Q15633 366 aaKnown RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 GRIK4Q16099 956 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 NFRKBQ6P4R8 1299 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 KRBA2Q6ZNG9 492 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SV2BQ7L1I2 683 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 GPBP1Q86WP2 473 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SYT2Q8N9I0 419 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 GPT2Q8TD30 523 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 DIS3LQ8TF46 1054 aaKnown RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 LMBR1Q8WVP7 490 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 TRAPPC12Q8WVT3 735 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 CCDC34Q96HJ3 373 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SENP6Q9GZR1 1112 aaPredicted RBP8.55□□□□□ -1.04
SCAPER-221ENST00000568549 TNMDQ9H2S6 317 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 SETD4Q9NVD3 440 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 DACT1Q9NYF0 836 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 HDAC6Q9UBN7 1215 aa8.55□□□□□ -1.04
SCAPER-221ENST00000568549 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-221ENST00000568549 DGAT1O75907 488 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 KRT18P05783 430 aaKnown RBP8.54□□□□□ -1.04
SCAPER-221ENST00000568549 GNAT1P11488 350 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 EN2P19622 333 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-221ENST00000568549 AFMP43652 599 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 AMPD3Q01432 767 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
SCAPER-221ENST00000568549 TBC1D8BQ0IIM8 1120 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 EMC2Q15006 297 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 RINT1Q6NUQ1 792 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 KANK3Q6NY19 840 aa8.54□□□□□ -1.04
SCAPER-221ENST00000568549 PADI6Q6TGC4 694 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms