RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 PAK2Q13177 524 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 SKIV2LQ15477 1246 aaKnown RBP16.3■□□□□ 0.2
CMTM3-215ENST00000568477 INF2Q27J81 1249 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 KRT40Q6A162 431 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
CMTM3-215ENST00000568477 KIAA0319LQ8IZA0 1049 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 NECAB1Q8N987 351 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 RDM1Q8NG50 284 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
CMTM3-215ENST00000568477 GTF3C6Q969F1 213 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 FTHL17Q9BXU8 183 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 UNC45AQ9H3U1 944 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 SUGCTQ9HAC7 445 aa16.3■□□□□ 0.2
CMTM3-215ENST00000568477 ENPP3O14638 875 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 LPXNO60711 386 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 PSMD10O75832 226 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 OATP04181 439 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 PRKCEQ02156 737 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 ME3Q16798 604 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 TJAP1Q5JTD0 557 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 MIER3Q7Z3K6 550 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 FBXO22Q8NEZ5 403 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
CMTM3-215ENST00000568477 GJA10Q969M2 543 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 C17orf80Q9BSJ5 609 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 LMCD1Q9NZU5 365 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
CMTM3-215ENST00000568477 PADI3Q9ULW8 664 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 GINS2Q9Y248 185 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 COL4A4P53420 1690 aaPredicted RBP16.29■□□□□ 0.2
CMTM3-215ENST00000568477 COL4A6Q14031 1691 aa16.29■□□□□ 0.2
CMTM3-215ENST00000568477 MAGEB2O15479 319 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 ZNF862O60290 1169 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 DTNBO60941 627 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 LARGE1O95461 756 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 SEC24BO95487 1268 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 LETM2Q2VYF4 491 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 METTL13Q8N6R0 699 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 ETNPPLQ8TBG4 499 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 NRBP2Q9NSY0 501 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 GJB4Q9NTQ9 266 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 NCOR1O75376 2440 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 TTC3P53804 2025 aa16.28■□□□□ 0.2
CMTM3-215ENST00000568477 GCFC2P16383 781 aaKnown RBP16.27■□□□□ 0.2
CMTM3-215ENST00000568477 MRPS5P82675 430 aaKnown RBP16.27■□□□□ 0.2
CMTM3-215ENST00000568477 UGCGQ16739 394 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 EPC2Q52LR7 807 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 ODR4Q5SWX8 454 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 FAM43BQ6ZT52 329 aaPredicted RBP16.27■□□□□ 0.2
CMTM3-215ENST00000568477 FIBCD1Q8N539 461 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 OXER1Q8TDS5 423 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 MAP7D2Q96T17 732 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 NAP1L4Q99733 375 aaKnown RBP16.27■□□□□ 0.2
CMTM3-215ENST00000568477 BACH2Q9BYV9 841 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 BRMS1Q9HCU9 246 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 EVPLQ92817 2033 aa16.27■□□□□ 0.2
CMTM3-215ENST00000568477 BRWD1Q9NSI6 2320 aa16.27■□□□□ 0.19
CMTM3-215ENST00000568477 ADGRA3Q8IWK6 1321 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 SLC37A4O43826 429 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 RPS6KA5O75582 802 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 FDPSP14324 419 aaKnown RBP16.26■□□□□ 0.19
CMTM3-215ENST00000568477 KRT2P35908 639 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 CRYBB1P53674 252 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-215ENST00000568477 NFX1Q12986 1120 aaKnown RBP16.26■□□□□ 0.19
CMTM3-215ENST00000568477 KIZQ2M2Z5 673 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 PPP4R3AQ6IN85 833 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 B3GNT9Q6UX72 402 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 PIK3AP1Q6ZUJ8 805 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 RTN4RL1Q86UN2 441 aaPredicted RBP16.26■□□□□ 0.19
CMTM3-215ENST00000568477 NPAS4Q8IUM7 802 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 TMEM192Q8IY95 271 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 NSUN7Q8NE18 718 aaKnown RBP16.26■□□□□ 0.19
CMTM3-215ENST00000568477 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 ASB2Q96Q27 587 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 PPP1R16BQ96T49 567 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 ERVK-5Q9HDB9 667 aa16.26■□□□□ 0.19
CMTM3-215ENST00000568477 VTNP04004 478 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 STAG3L1P0CL83 205 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 TMOD1P28289 359 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 CLCN3P51790 818 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 TMEM40Q8WWA1 233 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 OSMRQ99650 979 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 TMX1Q9H3N1 280 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 CDHR5Q9HBB8 845 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 RC3H2Q9HBD1 1191 aaKnown RBP16.25■□□□□ 0.19
CMTM3-215ENST00000568477 KCNMB3Q9NPA1 279 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 SEPT9Q9UHD8 586 aaPredicted RBP16.25■□□□□ 0.19
CMTM3-215ENST00000568477 COG5Q9UP83 839 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 AKT3Q9Y243 479 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
CMTM3-215ENST00000568477 WDR81Q562E7 1941 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 LOXHD1Q8IVV2 1947 aa16.25■□□□□ 0.19
CMTM3-215ENST00000568477 H3BNC9 293 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms