RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 LRRC15Q8TF66 581 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 LMBR1Q8WVP7 490 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 CCDC43Q96MW1 224 aaKnown RBP17.54■□□□□ 0.4
SPG7-218ENST00000568205 PANK2Q9BZ23 570 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 CYP26B1Q9NR63 512 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 SETD4Q9NVD3 440 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 GTF2IRD1Q9UHL9 959 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 KCNH3Q9ULD8 1083 aa17.54■□□□□ 0.4
SPG7-218ENST00000568205 SCN10AQ9Y5Y9 1956 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 GOLGA6L22H0YM25 854 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 GADD45BO75293 160 aaPredicted RBP17.53■□□□□ 0.4
SPG7-218ENST00000568205 EYA4O95677 639 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 CDK7P50613 346 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 NPEPPSP55786 919 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 IGBP1P78318 339 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 MTERF2Q49AM1 385 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 SLC39A5Q6ZMH5 540 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 TRAPPC12Q8WVT3 735 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 CEP170P1Q96L14 293 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 SH2D3AQ9BRG2 576 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 GOLPH3LQ9H4A5 285 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 STK17AQ9UEE5 414 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 HPSEQ9Y251 543 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 PPME1Q9Y570 386 aa17.53■□□□□ 0.4
SPG7-218ENST00000568205 ARHGEF35A5YM69 484 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 GNAT1P11488 350 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 STAT6P42226 847 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 RARRES1P49788 294 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 NDUFA8P51970 172 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 UBE2HP62256 183 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 HIC1Q14526 733 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 SNX17Q15036 470 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 E2F4Q16254 413 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 NAALADL2Q58DX5 795 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 C1orf53Q5VUE5 145 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 RAD54LQ92698 747 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 CEP89Q96ST8 783 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 PYM1Q9BRP8 204 aaKnown RBP17.52■□□□□ 0.4
SPG7-218ENST00000568205 BLOC1S4Q9NUP1 217 aa17.52■□□□□ 0.4
SPG7-218ENST00000568205 POLR2DO15514 142 aaKnown RBP17.51■□□□□ 0.39
SPG7-218ENST00000568205 C22orf31O95567 290 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 PLA2G4BP0C869 781 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 ADAM17P78536 824 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 ZNF200P98182 395 aaPredicted RBP17.51■□□□□ 0.39
SPG7-218ENST00000568205 MARCH8Q5T0T0 291 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 GDF6Q6KF10 455 aaPredicted RBP17.51■□□□□ 0.39
SPG7-218ENST00000568205 IQUBQ8NA54 791 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 DHX58Q96C10 678 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 TUBE1Q9UJT0 475 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 TCHHQ07283 1943 aa17.51■□□□□ 0.39
SPG7-218ENST00000568205 MBLAC1A4D2B0 266 aaPredicted RBP17.5■□□□□ 0.39
SPG7-218ENST00000568205 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
SPG7-218ENST00000568205 RFC5P40937 340 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 SYKP43405 635 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 TBC1D8BQ0IIM8 1120 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 LRRC26Q2I0M4 334 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 PADI6Q6TGC4 694 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 MTHFD1LQ6UB35 978 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 SYT2Q8N9I0 419 aaPredicted RBP17.5■□□□□ 0.39
SPG7-218ENST00000568205 LARP4BQ92615 738 aaKnown RBP17.5■□□□□ 0.39
SPG7-218ENST00000568205 CUEDC2Q9H467 287 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
SPG7-218ENST00000568205 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
SPG7-218ENST00000568205 MROH7Q68CQ1 1323 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 MAGEB2O15479 319 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 TREHO43280 583 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 USO1O60763 962 aaKnown RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 PQBP1O60828 265 aaKnown RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 MAFO75444 373 aaPredicted RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 DGAT1O75907 488 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 KLRC1P26715 233 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 POLGP54098 1239 aaPredicted RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 SLC12A3P55017 1021 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 RTP1P59025 263 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 FAM160A1Q05DH4 1040 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 MCM6Q14566 821 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 PTGISQ16647 500 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 TRIM60Q495X7 471 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 ANKRD33Q7Z3H0 272 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 FAM126BQ8IXS8 530 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 SLC7A3Q8WY07 619 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 ZBTB10Q96DT7 871 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 JPH2Q9BR39 696 aaPredicted RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 DHX33Q9H6R0 707 aaKnown RBP17.49■□□□□ 0.39
SPG7-218ENST00000568205 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
SPG7-218ENST00000568205 BRCA2P51587 3418 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 IGKV6-21A0A0C4DH24 114 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 ACTN4O43707 911 aaKnown RBP17.48■□□□□ 0.39
SPG7-218ENST00000568205 B4GALT4O60513 344 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 LIG1P18858 919 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 MCM4P33991 863 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 TLE2Q04725 743 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 DHX8Q14562 1220 aaKnown RBP17.48■□□□□ 0.39
SPG7-218ENST00000568205 EMC2Q15006 297 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 SV2BQ7L1I2 683 aa17.48■□□□□ 0.39
SPG7-218ENST00000568205 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms