RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 EML1O00423 815 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 PRKAR2AP13861 404 aaKnown RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 GAP43P17677 238 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 SFNP31947 248 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 IRX3P78415 501 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 MRPS9P82933 396 aaKnown RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 KCNJ12Q14500 433 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 FAM110CQ1W6H9 321 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 VSIG10LQ86VR7 867 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 RIOX2Q8IUF8 465 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 MYOCDQ8IZQ8 938 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 CSGALNACT2Q8N6G5 542 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 GTF3C2Q8WUA4 911 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 ZNF830Q96NB3 372 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 RTN4Q9NQC3 1192 aaKnown RBP16.19■□□□□ 0.18
COMMD4-221ENST00000567935 AGTPBP1Q9UPW5 1226 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 DNAH12Q6ZR08 3092 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 LTBP2Q14767 1821 aa16.19■□□□□ 0.18
COMMD4-221ENST00000567935 FCER1AP12319 257 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 EIF2AK2P19525 551 aaKnown RBP16.18■□□□□ 0.18
COMMD4-221ENST00000567935 JAK3P52333 1124 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 COPB1P53618 953 aaKnown RBP16.18■□□□□ 0.18
COMMD4-221ENST00000567935 SMAD3P84022 425 aaKnown RBP16.18■□□□□ 0.18
COMMD4-221ENST00000567935 KRT76Q01546 638 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 TRIM14Q14142 442 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 KRT31Q15323 416 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-221ENST00000567935 PPP4R3CPQ6ZMV5 832 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 IL31RAQ8NI17 732 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 UNC45AQ9H3U1 944 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 INTS13Q9NVM9 706 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 CYP39A1Q9NYL5 469 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 RIPK3Q9Y572 518 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
COMMD4-221ENST00000567935 PLXNB2O15031 1838 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 B4DLN1 442 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 N4BP3O15049 544 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 DHX15O43143 795 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 DKC1O60832 514 aaKnown RBP eCLIP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 TBCAO75347 108 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 SLITRK3O94933 977 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 LYPLA2O95372 231 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 P4HBP07237 508 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 NR3C2P08235 984 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 TBX2Q13207 712 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 ADAMTS19Q8TE59 1207 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 DYDC2Q96IM9 177 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 INPP4AQ96PE3 977 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 DUSP9Q99956 384 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 SRRTQ9BXP5 876 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 ZSWIM4Q9H7M6 989 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 SLC39A2Q9NP94 309 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 KCND1Q9NSA2 647 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 SEL1LQ9UBV2 794 aa16.17■□□□□ 0.18
COMMD4-221ENST00000567935 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.17■□□□□ 0.18
COMMD4-221ENST00000567935 CHMP2AO43633 222 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 SLC25A27O95847 323 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 TPM1P09493 284 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 MYCLP12524 364 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-221ENST00000567935 SKILP12757 684 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 PBX1P40424 430 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 CYP4A11Q02928 519 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 GIT2Q14161 759 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 NOLC1Q14978 699 aaKnown RBP eCLIP16.16■□□□□ 0.18
COMMD4-221ENST00000567935 GNPTABQ3T906 1256 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 ARSHQ5FYA8 562 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 HERC4Q5GLZ8 1057 aaPredicted RBP16.16■□□□□ 0.18
COMMD4-221ENST00000567935 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 LHX8Q68G74 356 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 ANKRD40Q6AI12 368 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 TPH2Q8IWU9 490 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 UIMC1Q96RL1 719 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 SENP7Q9BQF6 1050 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 BHMT2Q9H2M3 363 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 ODF2LQ9ULJ1 636 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 NFASCO94856 1347 aa16.16■□□□□ 0.18
COMMD4-221ENST00000567935 A0A1W2PQC6 194 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 TRIM49BA6NDI0 452 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 LGALS16A8MUM7 142 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 WDR64B1ANS9 1081 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 GNA14O95837 355 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CYP2B6P20813 491 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 PMS1P54277 932 aaKnown RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CCZ1BP86790 482 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CCZ1P86791 482 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 LRMPQ12912 555 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CTTNQ14247 550 aaKnown RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 PLS1Q14651 629 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 GRIN2CQ14957 1233 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 HSP90AA4PQ58FG1 418 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 ZNF746Q6NUN9 644 aaPredicted RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 IRF2BP1Q8IU81 584 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 IQCDQ96DY2 449 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms