RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 RPAINQ86UA6 219 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 C4orf19Q8IY42 314 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 RETREG2Q8NC44 543 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 DNAJB3Q8WWF6 145 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 NIFKQ9BYG3 293 aaKnown RBP19.29■□□□□ 0.68
COMMD4-220ENST00000567720 ZSCAN16Q9H4T2 348 aaPredicted RBP19.29■□□□□ 0.68
COMMD4-220ENST00000567720 IL23AQ9NPF7 189 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 PCDHA2Q9Y5H9 948 aa19.29■□□□□ 0.68
COMMD4-220ENST00000567720 SMIM35A0A1B0GVV1 85 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 PP2D1A8MPX8 630 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 DKC1O60832 514 aaKnown RBP eCLIP19.28■□□□□ 0.68
COMMD4-220ENST00000567720 F13A1P00488 732 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 ACRP10323 421 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 MGAT3Q09327 533 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 C16orf59Q7L2K0 433 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 LINC01465Q8N7H1 131 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 OSBPL7Q9BZF2 842 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 NRBP2Q9NSY0 501 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 CLIC4Q9Y696 253 aa19.28■□□□□ 0.68
COMMD4-220ENST00000567720 ZBTB39O15060 712 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 NBNO60934 754 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 LYPLA2O95372 231 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 YWHABP31946 246 aaKnown RBP19.27■□□□□ 0.68
COMMD4-220ENST00000567720 RFC2P35250 354 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 CLCN3P51790 818 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 NPEPPSP55786 919 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 PTPAQ15257 358 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 POTEGQ6S5H5 508 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 DTHD1Q6ZMT9 781 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 DEFB128Q7Z7B8 93 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 CATSPER3Q86XQ3 398 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 TPH2Q8IWU9 490 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 TDHQ8IZJ6 230 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
COMMD4-220ENST00000567720 USP28Q96RU2 1077 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.27■□□□□ 0.68
COMMD4-220ENST00000567720 LRWD1Q9UFC0 647 aa19.27■□□□□ 0.68
COMMD4-220ENST00000567720 VWA3AA6NCI4 1184 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 RSPH10B2B2RC85 870 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 BMP15O95972 392 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 RSPH10BP0C881 870 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 MRPS6P82932 125 aaKnown RBP19.26■□□□□ 0.67
COMMD4-220ENST00000567720 TBC1D8BQ0IIM8 1120 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 TMEM62Q0P6H9 643 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 FAM26DQ5JW98 314 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 TMEM240Q5SV17 173 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 ARL6IP4Q66PJ3 421 aaKnown RBP19.26■□□□□ 0.67
COMMD4-220ENST00000567720 HAUS3Q68CZ6 603 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 PSRC1Q6PGN9 363 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-220ENST00000567720 LRRC71Q8N4P6 559 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 ERMNQ8TAM6 284 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 POLR3CQ9BUI4 534 aaPredicted RBP19.26■□□□□ 0.67
COMMD4-220ENST00000567720 TUFT1Q9NNX1 390 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 CYP26B1Q9NR63 512 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 MYH11P35749 1972 aa19.26■□□□□ 0.67
COMMD4-220ENST00000567720 CHRNA1P02708 482 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 CXCL10P02778 98 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 PDIA4P13667 645 aaKnown RBP19.25■□□□□ 0.67
COMMD4-220ENST00000567720 RPA1P27694 616 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 GRIN1Q05586 938 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 PDIA5Q14554 519 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 SHHQ15465 462 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 ECM1Q16610 540 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 TCTN1Q2MV58 587 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 RSPH3Q86UC2 560 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 KIAA0319LQ8IZA0 1049 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 SNX29Q8TEQ0 813 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 MMTAG2Q9BU76 263 aaKnown RBP19.25■□□□□ 0.67
COMMD4-220ENST00000567720 RAB34Q9BZG1 259 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 ZDHHC9Q9Y397 364 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 CDY2AQ9Y6F7 541 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 SZT2Q5T011 3432 aa19.25■□□□□ 0.67
COMMD4-220ENST00000567720 IGKV6-21A0A0C4DH24 114 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 A0A1W2PPC1 479 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 MAGEB2O15479 319 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 BRD1O95696 1058 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 RPLP2P05387 115 aaKnown RBP19.24■□□□□ 0.67
COMMD4-220ENST00000567720 PFKMP08237 780 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 CDC25AP30304 524 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 CCT6AP40227 531 aaKnown RBP19.24■□□□□ 0.67
COMMD4-220ENST00000567720 CEBPZQ03701 1054 aaKnown RBP19.24■□□□□ 0.67
COMMD4-220ENST00000567720 DRP2Q13474 957 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 ZNF365Q70YC5 407 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 METTL13Q8N6R0 699 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 PIGOQ8TEQ8 1089 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 CEP170P1Q96L14 293 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 BMP2KQ9NSY1 1161 aaPredicted RBP19.24■□□□□ 0.67
COMMD4-220ENST00000567720 TRPV2Q9Y5S1 764 aa19.24■□□□□ 0.67
COMMD4-220ENST00000567720 A0A087WWV3 80 aa19.23■□□□□ 0.67
COMMD4-220ENST00000567720 MAFO75444 373 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 PARNO95453 639 aaKnown RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 VTNP04004 478 aa19.23■□□□□ 0.67
COMMD4-220ENST00000567720 NASPP49321 788 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 RARRES1P49788 294 aa19.23■□□□□ 0.67
COMMD4-220ENST00000567720 MKRN4PQ13434 485 aaPredicted RBP19.23■□□□□ 0.67
COMMD4-220ENST00000567720 EFCAB12Q6NXP0 572 aa19.23■□□□□ 0.67
COMMD4-220ENST00000567720 PPP1R16BQ96T49 567 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms