RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 CKAP2LQ8IYA6 745 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 RNF214Q8ND24 703 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 ERCC4Q92889 916 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 SYAP1Q96A49 352 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 NUP62CLQ9H1M0 184 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 TSPY26PQ9H489 355 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 RIOX1Q9H6W3 641 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 JMJD4Q9H9V9 463 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 KCNK4Q9NYG8 393 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 NOP53Q9NZM5 478 aaKnown RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 PARP2Q9UGN5 583 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 FBXO2Q9UK22 296 aaPredicted RBP6.55□□□□□ -1.36
SF3B3-210ENST00000567654 HDAC9Q9UKV0 1011 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 SCN4AP35499 1836 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 MYH11P35749 1972 aa6.55□□□□□ -1.36
SF3B3-210ENST00000567654 A0A0G2JMZ2 1700 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 TMEM238LA0A1B0GVL6 79 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1W2PQ27 194 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1W2PQ64 194 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 A0A1W2PQD8 194 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 GOLGA6L4A6NEF3 574 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 H3BRJ5 948 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 RNF225M0QZC1 329 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PIK3R2O00459 728 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 FSCN2O14926 492 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 EDIL3O43854 480 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PPP6R2O75170 966 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 FBXO24O75426 580 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PFKFB1P16118 471 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 YBX3P16989 372 aaKnown RBP eCLIP6.54□□□□□ -1.366e-9■□□□□ 10.4
SF3B3-210ENST00000567654 ECE1P42892 770 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 GNAQP50148 359 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 NLRP5P59047 1200 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 SNAP25P60880 206 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 RAC1P63000 192 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ICA1Q05084 483 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 SAFBQ15424 915 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 IL17AQ16552 155 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF423Q2M1K9 1284 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ABCB5Q2M3G0 1257 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ASPRV1Q53RT3 343 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PRRT3Q5FWE3 981 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 L1TD1Q5T7N2 865 aaKnown RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 DTHD1Q6ZMT9 781 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PIK3AP1Q6ZUJ8 805 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 TMEM179Q6ZVK1 233 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 USP49Q70CQ1 688 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 MIGA2Q7L4E1 593 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 HEATR3Q7Z4Q2 680 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ADGRF4Q8IZF3 695 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 BLIDQ8IZY5 108 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 KCNG4Q8TDN1 519 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ACER1Q8TDN7 264 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 FBF1Q8TES7 1133 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 JDP2Q8WYK2 163 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 MRPS27Q92552 414 aaKnown RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 MKL1Q969V6 931 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 COA7Q96BR5 231 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 KLHDC7BQ96G42 594 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC17Q96LX7 622 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 TEPSINQ96N21 525 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 GLIS2Q9BZE0 524 aaPredicted RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 DDX19AQ9NUU7 478 aaKnown RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 BARHL2Q9NY43 387 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 TMOD2Q9NZR1 351 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 NYAP2Q9P242 653 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ZBTB21Q9ULJ3 1066 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PCDHA6Q9UN73 950 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PCDHA4Q9UN74 947 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 HPSEQ9Y251 543 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 PCDHA8Q9Y5H6 950 aa6.54□□□□□ -1.36
SF3B3-210ENST00000567654 ZNFX1Q9P2E3 1918 aaKnown RBP6.54□□□□□ -1.36
SF3B3-210ENST00000567654 A0A087X0B3 334 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 FAM237AA0A1B0GTK4 181 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 AP5Z1O43299 807 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 CUTAO60888 179 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 NDUFB10O96000 172 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 ESRRAP11474 423 aaPredicted RBP6.53□□□□□ -1.36
SF3B3-210ENST00000567654 XBP1P17861 261 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 SMARCA1P28370 1054 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 NAPAP54920 295 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 FAM160A1Q05DH4 1040 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 PCDH1Q08174 1060 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 IKBKEQ14164 716 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 RASA3Q14644 834 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 COL19A1Q14993 1142 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 TNIP1Q15025 636 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 ZNF174Q15697 407 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 MAP3K11Q16584 847 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 CCDC96Q2M329 555 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 RILPL1Q5EBL4 403 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 TTC38Q5R3I4 469 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 FKBP1CQ5VVH2 108 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 RESP18Q5W5W9 173 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 ARHGAP27Q6ZUM4 889 aa6.53□□□□□ -1.36
SF3B3-210ENST00000567654 FAM83AQ86UY5 434 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms