RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 MAGEB2O15479 319 aa15.08■□□□□ 0
CLK3-218ENST00000566926 ATP4AP20648 1035 aa15.08■□□□□ 0
CLK3-218ENST00000566926 KLRC1P26715 233 aa15.08■□□□□ 0
CLK3-218ENST00000566926 MCM4P33991 863 aa15.08■□□□□ 0
CLK3-218ENST00000566926 KRT85P78386 507 aa15.08■□□□□ 0
CLK3-218ENST00000566926 RESTQ13127 1097 aa15.08■□□□□ 0
CLK3-218ENST00000566926 MBTPS1Q14703 1052 aa15.08■□□□□ 0
CLK3-218ENST00000566926 PLEKHG4Q58EX7 1191 aa15.08■□□□□ 0
CLK3-218ENST00000566926 B3GNT9Q6UX72 402 aa15.08■□□□□ 0
CLK3-218ENST00000566926 RUFY4Q6ZNE9 571 aa15.08■□□□□ 0
CLK3-218ENST00000566926 PBX4Q9BYU1 374 aa15.08■□□□□ 0
CLK3-218ENST00000566926 SEMA6BQ9H3T3 888 aa15.08■□□□□ 0
CLK3-218ENST00000566926 CFAP45Q9UL16 551 aa15.08■□□□□ 0
CLK3-218ENST00000566926 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0
CLK3-218ENST00000566926 SQORQ9Y6N5 450 aa15.08■□□□□ 0
CLK3-218ENST00000566926 GRXCR1A8MXD5 290 aa15.07■□□□□ 0
CLK3-218ENST00000566926 OATP04181 439 aa15.07■□□□□ 0
CLK3-218ENST00000566926 MRPS6P82932 125 aaKnown RBP15.07■□□□□ 0
CLK3-218ENST00000566926 GUCY1B3Q02153 619 aa15.07■□□□□ 0
CLK3-218ENST00000566926 PPP2R5CQ13362 524 aa15.07■□□□□ 0
CLK3-218ENST00000566926 EARS2Q5JPH6 523 aaKnown RBP15.07■□□□□ 0
CLK3-218ENST00000566926 MCTP1Q6DN14 999 aa15.07■□□□□ 0
CLK3-218ENST00000566926 FAM43BQ6ZT52 329 aaPredicted RBP15.07■□□□□ 0
CLK3-218ENST00000566926 Q7L0L9 218 aa15.07■□□□□ 0
CLK3-218ENST00000566926 ZNF710Q8N1W2 664 aa15.07■□□□□ 0
CLK3-218ENST00000566926 USP38Q8NB14 1042 aa15.07■□□□□ 0
CLK3-218ENST00000566926 DBF4BQ8NFT6 615 aa15.07■□□□□ 0
CLK3-218ENST00000566926 TRAPPC12Q8WVT3 735 aa15.07■□□□□ 0
CLK3-218ENST00000566926 ZNF396Q96N95 335 aaPredicted RBP15.07■□□□□ 0
CLK3-218ENST00000566926 SCAND2PQ9GZW5 306 aaPredicted RBP15.07■□□□□ 0
CLK3-218ENST00000566926 FAM49AQ9H0Q0 323 aaPredicted RBP15.07■□□□□ 0
CLK3-218ENST00000566926 SLC28A3Q9HAS3 691 aa15.07■□□□□ 0
CLK3-218ENST00000566926 CDY2AQ9Y6F7 541 aa15.07■□□□□ 0
CLK3-218ENST00000566926 CHRNA1P02708 482 aa15.06■□□□□ 0
CLK3-218ENST00000566926 U2AF2P26368 475 aaKnown RBP eCLIP15.06■□□□□ 0
CLK3-218ENST00000566926 TMOD1P28289 359 aa15.06■□□□□ 0
CLK3-218ENST00000566926 WDR5P61964 334 aaKnown RBP15.06■□□□□ 0
CLK3-218ENST00000566926 PSMC5P62195 406 aa15.06■□□□□ 0
CLK3-218ENST00000566926 PRKCEQ02156 737 aa15.06■□□□□ 0
CLK3-218ENST00000566926 MGAT3Q09327 533 aa15.06■□□□□ 0
CLK3-218ENST00000566926 ORC2Q13416 577 aaPredicted RBP15.06■□□□□ 0
CLK3-218ENST00000566926 CALCRLQ16602 461 aa15.06■□□□□ 0
CLK3-218ENST00000566926 XKR3Q5GH77 459 aa15.06■□□□□ 0
CLK3-218ENST00000566926 FOXD4L5Q5VV16 416 aaPredicted RBP15.06■□□□□ 0
CLK3-218ENST00000566926 POTEDQ86YR6 584 aa15.06■□□□□ 0
CLK3-218ENST00000566926 FOXD4L4Q8WXT5 416 aaPredicted RBP15.06■□□□□ 0
CLK3-218ENST00000566926 GJA10Q969M2 543 aa15.06■□□□□ 0
CLK3-218ENST00000566926 IFIH1Q9BYX4 1025 aaKnown RBP15.06■□□□□ 0
CLK3-218ENST00000566926 ZNF576Q9H609 170 aa15.06■□□□□ 0
CLK3-218ENST00000566926 TRPV2Q9Y5S1 764 aa15.06■□□□□ 0
CLK3-218ENST00000566926 FAM205CA6NFA0 338 aa15.05■□□□□ -0
CLK3-218ENST00000566926 ZNF862O60290 1169 aa15.05■□□□□ -0
CLK3-218ENST00000566926 NEMFO60524 1076 aa15.05■□□□□ -0
CLK3-218ENST00000566926 AMHP03971 560 aa15.05■□□□□ -0
CLK3-218ENST00000566926 ODR4Q5SWX8 454 aa15.05■□□□□ -0
CLK3-218ENST00000566926 TRMT1LQ7Z2T5 733 aaKnown RBP15.05■□□□□ -0
CLK3-218ENST00000566926 FERMT3Q86UX7 667 aa15.05■□□□□ -0
CLK3-218ENST00000566926 HERC6Q8IVU3 1022 aa15.05■□□□□ -0
CLK3-218ENST00000566926 TMEM87AQ8NBN3 555 aa15.05■□□□□ -0
CLK3-218ENST00000566926 HAS1Q92839 578 aa15.05■□□□□ -0
CLK3-218ENST00000566926 FAM161BQ96MY7 647 aa15.05■□□□□ -0
CLK3-218ENST00000566926 ZBED2Q9BTP6 218 aa15.05■□□□□ -0
CLK3-218ENST00000566926 CELF4Q9BZC1 486 aaKnown RBP15.05■□□□□ -0
CLK3-218ENST00000566926 NOL7Q9UMY1 257 aaKnown RBP15.05■□□□□ -0
CLK3-218ENST00000566926 PCDHA12Q9UN75 941 aa15.05■□□□□ -0
CLK3-218ENST00000566926 KDM3AQ9Y4C1 1321 aa15.05■□□□□ -0
CLK3-218ENST00000566926 TTC3P53804 2025 aa15.04■□□□□ -0
CLK3-218ENST00000566926 ZBTB42B2RXF5 422 aa15.04■□□□□ -0
CLK3-218ENST00000566926 P4HBP07237 508 aaKnown RBP15.04■□□□□ -0
CLK3-218ENST00000566926 GHRP10912 638 aa15.04■□□□□ -0
CLK3-218ENST00000566926 PBX2P40425 430 aa15.04■□□□□ -0
CLK3-218ENST00000566926 QARSP47897 775 aaKnown RBP15.04■□□□□ -0
CLK3-218ENST00000566926 TRAPPC10P48553 1259 aa15.04■□□□□ -0
CLK3-218ENST00000566926 TBC1D8BQ0IIM8 1120 aa15.04■□□□□ -0
CLK3-218ENST00000566926 EPHA7Q15375 998 aa15.04■□□□□ -0
CLK3-218ENST00000566926 SKOR2Q2VWA4 1001 aaPredicted RBP15.04■□□□□ -0
CLK3-218ENST00000566926 FBXO47Q5MNV8 452 aa15.04■□□□□ -0
CLK3-218ENST00000566926 TSHZ1Q6ZSZ6 1077 aa15.04■□□□□ -0
CLK3-218ENST00000566926 NOSTRINQ8IVI9 506 aa15.04■□□□□ -0
CLK3-218ENST00000566926 EXOC8Q8IYI6 725 aa15.04■□□□□ -0
CLK3-218ENST00000566926 METTL13Q8N6R0 699 aa15.04■□□□□ -0
CLK3-218ENST00000566926 MAP7D2Q96T17 732 aa15.04■□□□□ -0
CLK3-218ENST00000566926 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
CLK3-218ENST00000566926 NIFKQ9BYG3 293 aaKnown RBP15.04■□□□□ -0
CLK3-218ENST00000566926 TTYH1Q9H313 450 aaPredicted RBP15.04■□□□□ -0
CLK3-218ENST00000566926 VAV3Q9UKW4 847 aa15.04■□□□□ -0
CLK3-218ENST00000566926 STXBP5LQ9Y2K9 1186 aa15.04■□□□□ -0
CLK3-218ENST00000566926 TLL1O43897 1013 aa15.03■□□□□ -0
CLK3-218ENST00000566926 C22orf31O95567 290 aa15.03■□□□□ -0
CLK3-218ENST00000566926 RABGGTBP53611 331 aa15.03■□□□□ -0
CLK3-218ENST00000566926 LPIN1Q14693 890 aa15.03■□□□□ -0
CLK3-218ENST00000566926 UGCGQ16739 394 aa15.03■□□□□ -0
CLK3-218ENST00000566926 RILPL1Q5EBL4 403 aa15.03■□□□□ -0
CLK3-218ENST00000566926 PPP2R2DQ66LE6 453 aa15.03■□□□□ -0
CLK3-218ENST00000566926 NCAPH2Q6IBW4 605 aa15.03■□□□□ -0
CLK3-218ENST00000566926 EFCAB12Q6NXP0 572 aa15.03■□□□□ -0
CLK3-218ENST00000566926 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
CLK3-218ENST00000566926 ZBTB10Q96DT7 871 aa15.03■□□□□ -0
CLK3-218ENST00000566926 FTHL17Q9BXU8 183 aa15.03■□□□□ -0
CLK3-218ENST00000566926 NKX2-4Q9H2Z4 354 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms