RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 TMEM62Q0P6H9 643 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 FAM178BQ8IXR5 827 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 CKAP2LQ8IYA6 745 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 LINC01599Q8WXQ3 324 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 C1orf112Q9NSG2 853 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 LRFN2Q9ULH4 789 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 NLRC5Q86WI3 1866 aa31.37■■■□□ 2.61
UBFD1-206ENST00000566669 GPR182O15218 404 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 MMP1P03956 469 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 CPA1P15085 419 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 USP11P51784 963 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 TRIM22Q8IYM9 498 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 KIAA0319LQ8IZA0 1049 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 ZBTB10Q96DT7 871 aa31.36■■■□□ 2.61
UBFD1-206ENST00000566669 MAGEB2O15479 319 aa31.35■■■□□ 2.61
UBFD1-206ENST00000566669 RPS6KA5O75582 802 aa31.35■■■□□ 2.61
UBFD1-206ENST00000566669 SARSP49591 514 aaKnown RBP31.35■■■□□ 2.61
UBFD1-206ENST00000566669 NTRK3Q16288 839 aa31.35■■■□□ 2.61
UBFD1-206ENST00000566669 PRR16Q569H4 304 aa31.35■■■□□ 2.61
UBFD1-206ENST00000566669 RTN4RL1Q86UN2 441 aaPredicted RBP31.35■■■□□ 2.61
UBFD1-206ENST00000566669 PRKAG3Q9UGI9 489 aa31.35■■■□□ 2.61
UBFD1-206ENST00000566669 CRYBB1P53674 252 aaPredicted RBP31.34■■■□□ 2.61
UBFD1-206ENST00000566669 NFX1Q12986 1120 aaKnown RBP31.34■■■□□ 2.61
UBFD1-206ENST00000566669 GJD3Q8N144 294 aa31.34■■■□□ 2.61
UBFD1-206ENST00000566669 PHKBQ93100 1093 aa31.34■■■□□ 2.61
UBFD1-206ENST00000566669 WDR64B1ANS9 1081 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 RIT2Q99578 217 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 SLC26A6Q9BXS9 759 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 ERVK-5Q9HDB9 667 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 PLAGL2Q9UPG8 496 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 SAMM50Q9Y512 469 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 PCDHB7Q9Y5E2 793 aa31.33■■■□□ 2.61
UBFD1-206ENST00000566669 DENND3A2RUS2 1198 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 GRM6O15303 877 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 C22orf31O95567 290 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 TMOD1P28289 359 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 PDIA3P30101 505 aaKnown RBP31.32■■■□□ 2.6
UBFD1-206ENST00000566669 TMEM31Q5JXX7 168 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 SLC24A5Q71RS6 500 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 RUFY3Q7L099 469 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 AAASQ9NRG9 546 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 RGS18Q9NS28 235 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 CLDND1Q9NY35 253 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 GINS2Q9Y248 185 aa31.32■■■□□ 2.6
UBFD1-206ENST00000566669 ARIH1Q9Y4X5 557 aaPredicted RBP31.32■■■□□ 2.6
UBFD1-206ENST00000566669 MRPL42Q9Y6G3 142 aaKnown RBP31.32■■■□□ 2.6
UBFD1-206ENST00000566669 ZBTB42B2RXF5 422 aa31.31■■■□□ 2.6
UBFD1-206ENST00000566669 SFNP31947 248 aa31.31■■■□□ 2.6
UBFD1-206ENST00000566669 CTC1Q2NKJ3 1217 aa31.31■■■□□ 2.6
UBFD1-206ENST00000566669 TMX1Q9H3N1 280 aa31.31■■■□□ 2.6
UBFD1-206ENST00000566669 NRBP2Q9NSY0 501 aa31.31■■■□□ 2.6
UBFD1-206ENST00000566669 PI4K2BG5E9Z4 385 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 RBAK-RBAKDNI3L0D1 243 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 GPR37L1O60883 481 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 ATP4AP20648 1035 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 CSPP1Q1MSJ5 1256 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 CPLX2Q6PUV4 134 aaKnown RBP31.3■■■□□ 2.6
UBFD1-206ENST00000566669 EP400NLQ6ZTU2 488 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 MAP7D2Q96T17 732 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 EPHX3Q9H6B9 360 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 ZSWIM6Q9HCJ5 1215 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 CYP46A1Q9Y6A2 500 aa31.3■■■□□ 2.6
UBFD1-206ENST00000566669 FSD2A1L4K1 749 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 H3BQ06 376 aaPredicted RBP31.29■■■□□ 2.6
UBFD1-206ENST00000566669 ALADP13716 330 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 SSTR3P32745 418 aaPredicted RBP31.29■■■□□ 2.6
UBFD1-206ENST00000566669 NLRP5P59047 1200 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 GALNT17Q6IS24 598 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 METTL13Q8N6R0 699 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 RDM1Q8NG50 284 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 LENG9Q96B70 501 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 ZNF274Q96GC6 653 aaPredicted RBP31.29■■■□□ 2.6
UBFD1-206ENST00000566669 TM6SF1Q9BZW5 370 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 GABBR1Q9UBS5 961 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 ST3GAL5Q9UNP4 418 aa31.29■■■□□ 2.6
UBFD1-206ENST00000566669 NOC2LQ9Y3T9 749 aaKnown RBP31.29■■■□□ 2.6
UBFD1-206ENST00000566669 CPLX1O14810 134 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 IL9P15248 144 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 JAK3P52333 1124 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 UBE3AQ05086 875 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 TMEM266Q2M3C6 531 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 ADAM2Q99965 735 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 ELAC1Q9H777 363 aaKnown RBP31.28■■■□□ 2.6
UBFD1-206ENST00000566669 DISC1Q9NRI5 854 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 PCDHB12Q9Y5F1 795 aa31.28■■■□□ 2.6
UBFD1-206ENST00000566669 GAS7O60861 476 aa31.27■■■□□ 2.6
UBFD1-206ENST00000566669 SSRP1Q08945 709 aaKnown RBP31.27■■■□□ 2.6
UBFD1-206ENST00000566669 POP1Q99575 1024 aaKnown RBP31.27■■■□□ 2.6
UBFD1-206ENST00000566669 VPS54Q9P1Q0 977 aa31.27■■■□□ 2.6
UBFD1-206ENST00000566669 HCN4Q9Y3Q4 1203 aa31.27■■■□□ 2.6
UBFD1-206ENST00000566669 HOXA2O43364 376 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 DEXIO95424 95 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 CDC42EP1Q00587 391 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 HYAL1Q12794 435 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 LRFN3Q9BTN0 628 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 TEKT3Q9BXF9 490 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 ALG13Q9NP73 1137 aaKnown RBP31.26■■■□□ 2.59
UBFD1-206ENST00000566669 TMEM161AQ9NX61 479 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 PCDHA4Q9UN74 947 aa31.26■■■□□ 2.59
UBFD1-206ENST00000566669 C9IYK1 514 aa31.25■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms