RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	VAT1L	Q9HCJ6	419 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	MTMR10	Q9NXD2	777 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	KIAA1024	Q9UPX6	916 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	CTDP1	Q9Y5B0	961 aa	Predicted RBP	7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	TRIP11	Q15643	1979 aa		7.5	□□□□□ -1.21
TCF4-233	ENST00000566376	BDP1	A6H8Y1	2624 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376		A0A0U1RQG5	324 aa	Predicted RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	CDK2AP1	O14519	115 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	DDAH1	O94760	285 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	CYP2C18	P33260	490 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	ITGA7	Q13683	1181 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	PGM5	Q15124	567 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	LY6K	Q17RY6	165 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	CCDC178	Q5BJE1	867 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM67	Q5HYA8	995 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM240	Q5SV17	173 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	IQSEC1	Q6DN90	963 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	APOA5	Q6Q788	366 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	TMTC3	Q6ZXV5	915 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	RUFY2	Q8WXA3	655 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	INSM2	Q96T92	566 aa	Predicted RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	AMN	Q9BXJ7	453 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	NIFK	Q9BYG3	293 aa	Known RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	AGXT2	Q9BYV1	514 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	OSBPL7	Q9BZF2	842 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	ANO2	Q9NQ90	1003 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	TRMT13	Q9NUP7	481 aa	Known RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	CXXC1	Q9P0U4	656 aa	Predicted RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	DDX41	Q9UJV9	622 aa	Known RBP	7.49	□□□□□ -1.21
TCF4-233	ENST00000566376		Q9Y3F1	56 aa		7.49	□□□□□ -1.21
TCF4-233	ENST00000566376	GRXCR1	A8MXD5	290 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	HAS3	O00219	553 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	EDIL3	O43854	480 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	CDC45	O75419	566 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	CFB	P00751	764 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	TIMP1	P01033	207 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	IL2RA	P01589	272 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	CSF2RA	P15509	400 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	UBA1	P22314	1058 aa	Known RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	CDC27	P30260	824 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	HOXC8	P31273	242 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	LIFR	P42702	1097 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	MBTPS1	Q14703	1052 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	PPP2R5B	Q15173	497 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM164	Q5U3C3	297 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	MFSD5	Q6N075	450 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	USP17L6P	Q6QN14	398 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	LYSMD3	Q7Z3D4	306 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	RALYL	Q86SE5	291 aa	Known RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	PCSK9	Q8NBP7	692 aa	Known RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	OR6J1	Q8NGC5	347 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	SCFD2	Q8WU76	684 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	AFG1L	Q8WV93	481 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	PIBF1	Q8WXW3	757 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	CLP1	Q92989	425 aa	Known RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	GLT1D1	Q96MS3	346 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	RMDN3	Q96TC7	470 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	MAP3K14	Q99558	947 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	MTA3	Q9BTC8	594 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	ADD3	Q9UEY8	706 aa	Known RBP	7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	ZMIZ1	Q9ULJ6	1067 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	PCDHA1	Q9Y5I3	950 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	SNX14	Q9Y5W7	946 aa		7.48	□□□□□ -1.21
TCF4-233	ENST00000566376	PNMA6F	A0A0J9YX94	578 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	SORBS3	O60504	671 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	F2	P00734	622 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	ZNF286B	P0CG31	522 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	ACR	P10323	421 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	TXN	P10599	105 aa	Known RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	CYP2C9	P11712	490 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	ITGB7	P26010	798 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	MCM5	P33992	734 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	HSPA4	P34932	840 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	UBE2S	Q16763	222 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	TRIM71	Q2Q1W2	868 aa	Known RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	HSDL1	Q3SXM5	330 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	WDR44	Q5JSH3	913 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	WWC2	Q6AWC2	1192 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	GDF6	Q6KF10	455 aa	Predicted RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	SEPT14	Q6ZU15	432 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	SPRED2	Q7Z698	418 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	VSIG10L	Q86VR7	867 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	MICU3	Q86XE3	530 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	RHBDD1	Q8TEB9	315 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	STK32A	Q8WU08	396 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	NUP133	Q8WUM0	1156 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	SCLY	Q96I15	445 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM87B	Q96K49	555 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	INPP4A	Q96PE3	977 aa	Predicted RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	TMEM39A	Q9NV64	488 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	MRPL11	Q9Y3B7	192 aa	Known RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	MYH11	P35749	1972 aa		7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	PDCD11	Q14690	1871 aa	Known RBP	7.47	□□□□□ -1.21
TCF4-233	ENST00000566376	DHX16	O60231	1041 aa	Known RBP	7.46	□□□□□ -1.22
TCF4-233	ENST00000566376	DTNB	O60941	627 aa		7.46	□□□□□ -1.22
TCF4-233	ENST00000566376	RAG1	P15918	1043 aa		7.46	□□□□□ -1.22
TCF4-233	ENST00000566376	IGFBP4	P22692	258 aa		7.46	□□□□□ -1.22
TCF4-233	ENST00000566376	PSMA6	P60900	246 aa	Known RBP	7.46	□□□□□ -1.22
TCF4-233	ENST00000566376	FPGS	Q05932	587 aa		7.46	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms