RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 DDX50Q9BQ39 737 aaKnown RBP7.05□□□□□ -1.28
LINC01043-201ENST00000565936 UBE2TQ9NPD8 197 aaPredicted RBP7.05□□□□□ -1.28
LINC01043-201ENST00000565936 IFNB1P01574 187 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 SKIP12755 728 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 WHAMMP3Q1A5X7 153 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 CEP55Q53EZ4 464 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 BSPRYQ5W0U4 402 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 USP17L6PQ6QN14 398 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 THNSL1Q8IYQ7 743 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 BANK1Q8NDB2 785 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 SEPT1Q8WYJ6 367 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 PPP1R16BQ96T49 567 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 VPS37BQ9H9H4 285 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 TMEM131LA2VDJ0 1609 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 REREQ9P2R6 1566 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 TBX3O15119 743 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 RRP9O43818 475 aaKnown RBP7.05□□□□□ -1.28
LINC01043-201ENST00000565936 ADCY8P40145 1251 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 FAM76AQ8TAV0 307 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 SCFD2Q8WU76 684 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 ZNF653Q96CK0 615 aa7.05□□□□□ -1.28
LINC01043-201ENST00000565936 MANSC4A6NHS7 340 aaPredicted RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KRIT1O00522 736 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KCNK3O14649 394 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PPP4CP60510 307 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 COG7P83436 770 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 SKIV2LQ15477 1246 aaKnown RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 XKR3Q5GH77 459 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 DENND2CQ68D51 928 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 CYB5R4Q7L1T6 521 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KLHL7Q8IXQ5 586 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 SMAP1Q8IYB5 467 aaPredicted RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 RAD54LQ92698 747 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 DYDC2Q96IM9 177 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 FANCLQ9NW38 375 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 CALCOCO1Q9P1Z2 691 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 FAM8A1Q9UBU6 413 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 POLIQ9UNA4 740 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 FARP1Q9Y4F1 1045 aaPredicted RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PCDHB6Q9Y5E3 794 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 TFRCP02786 760 aaKnown RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 C6orf222P0C671 652 aaPredicted RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 HSPA6P17066 643 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PPFIA1Q13136 1202 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 LAMC2Q13753 1193 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 TOGARAM2Q6ZUX3 1019 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 YAF2Q8IY57 180 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 MRFAP1L1Q96HT8 127 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 MROH8Q9H579 483 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 STRIP2Q9ULQ0 834 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PASKQ96RG2 1323 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 MCF2LO15068 1137 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 RFC5P40937 340 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 DGKDQ16760 1214 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 POLR3FQ9H1D9 316 aaPredicted RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 AAASQ9NRG9 546 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 HPCAL4Q9UM19 191 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ZNF148Q9UQR1 794 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 IQGAP1P46940 1657 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 NDUFB10O96000 172 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ATF2P15336 505 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KRT15P19012 456 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ZNF699Q32M78 642 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 LRRC31Q6UY01 552 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 SPATA24Q86W54 205 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 GANCQ8TET4 914 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PAGE5Q96GU1 130 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 TRPV6Q9H1D0 765 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 PDS5AQ29RF7 1337 aaKnown RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KPNA6O60684 536 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 LRRC41Q15345 812 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 C4orf50Q6ZRC1 276 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ENOSF1Q7L5Y1 443 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ERICH1Q86X53 443 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ENOX1Q8TC92 643 aaKnown RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 GLT1D1Q96MS3 346 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 ZDHHC15Q96MV8 337 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 TRIM56Q9BRZ2 755 aaKnown RBP7.04□□□□□ -1.28
LINC01043-201ENST00000565936 KCND2Q9NZV8 630 aa7.04□□□□□ -1.28
LINC01043-201ENST00000565936 SRGNP10124 158 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 CYP2B6P20813 491 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 RDM1Q8NG50 284 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 DAAM1Q9Y4D1 1078 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 DYNC1LI2O43237 492 aaPredicted RBP7.03□□□□□ -1.28
LINC01043-201ENST00000565936 CACNB1Q02641 598 aaPredicted RBP7.03□□□□□ -1.28
LINC01043-201ENST00000565936 PDIA5Q14554 519 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 TSGA10IPQ3SY00 556 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 CCDC121Q6ZUS5 278 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 CTAGE3PQ8IX95 158 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 PIGOQ8TEQ8 1089 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 PPP4R1Q8TF05 950 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 CFAP57Q96MR6 1250 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 LXNQ9BS40 222 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 TRIM31Q9BZY9 425 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 SLC38A7Q9NVC3 462 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 MAN1B1Q9UKM7 699 aa7.03□□□□□ -1.28
LINC01043-201ENST00000565936 DGAT1O75907 488 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms