RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 LZTS1Q9Y250 596 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 USTQ9Y2C2 406 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 OTOGLQ3ZCN5 2332 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 KIAA1217Q5T5P2 1943 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 TTC3P53804 2025 aa12.91□□□□□ -0.34
CAPN3-215ENST00000565559 CFAP47Q6ZTR5 3102 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 IBSPP21815 317 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-215ENST00000565559 ADAM17P78536 824 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 SP2Q02086 613 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-215ENST00000565559 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
CAPN3-215ENST00000565559 PADI6Q6TGC4 694 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 RIN2Q8WYP3 895 aaPredicted RBP12.9□□□□□ -0.34
CAPN3-215ENST00000565559 ERVK-5Q9HDB9 667 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 CYP26B1Q9NR63 512 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 TCP11L1Q9NUJ3 509 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 CDH22Q9UJ99 828 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 CDV3Q9UKY7 258 aaKnown RBP12.9□□□□□ -0.34
CAPN3-215ENST00000565559 CDY2AQ9Y6F7 541 aa12.9□□□□□ -0.34
CAPN3-215ENST00000565559 USP24Q9UPU5 2620 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 M0QZ92 97 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 SNHG28P0DPA3 235 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 CCND2P30279 289 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 GATMP50440 423 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 ATXN1P54253 815 aaKnown RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 ARHGAP8P85298 464 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 TDGQ13569 410 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 NEDD9Q14511 834 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 GNPTABQ3T906 1256 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 ATAT1Q5SQI0 421 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 IER5Q5VY09 327 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 METTL7BQ6UX53 244 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 VSIG10LQ86VR7 867 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 MRPS27Q92552 414 aaKnown RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 ACSF2Q96CM8 615 aaPredicted RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 TTC14Q96N46 770 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 LRRCC1Q9C099 1032 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 UBA5Q9GZZ9 404 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 AGO3Q9H9G7 860 aaKnown RBP12.89□□□□□ -0.35
CAPN3-215ENST00000565559 NCDNQ9UBB6 729 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 PCDHB7Q9Y5E2 793 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 SQORQ9Y6N5 450 aa12.89□□□□□ -0.35
CAPN3-215ENST00000565559 TBKBP1A7MCY6 615 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 KINO60870 393 aaKnown RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 LAG3P18627 525 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 MRPS6P82932 125 aaKnown RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 APOBRQ0VD83 1088 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 PPFIA1Q13136 1202 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 PAK2Q13177 524 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 PGM5Q15124 567 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 TMC7Q7Z402 723 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 RTN4RL1Q86UN2 441 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 TRIM50Q86XT4 487 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 GPIHBP1Q8IV16 184 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 COLGALT1Q8NBJ5 622 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 DNAJB3Q8WWF6 145 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 SECISBP2LQ93073 1101 aaKnown RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 SEC62Q99442 399 aaKnown RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 GPR20Q99678 358 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 MAP3K20Q9NYL2 800 aaKnown RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 SEPT9Q9UHD8 586 aaPredicted RBP12.88□□□□□ -0.35
CAPN3-215ENST00000565559 TUBE1Q9UJT0 475 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 ANAPC4Q9UJX5 808 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 DUSP12Q9UNI6 340 aa12.88□□□□□ -0.35
CAPN3-215ENST00000565559 HIDE1A8MVS5 230 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 SMAPO00193 183 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 EOMESO95936 686 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 ADRB1P08588 477 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
CAPN3-215ENST00000565559 HSD17B4P51659 736 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 PLCB3Q01970 1234 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 LMNB2Q03252 620 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 KRT17Q04695 432 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 TBC1D8BQ0IIM8 1120 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 ACAP1Q15027 740 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 QRICH1Q2TAL8 776 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
CAPN3-215ENST00000565559 KIAA1841Q6NSI8 718 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 XRRA1Q6P2D8 792 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 CYFIP1Q7L576 1253 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 ADGRF4Q8IZF3 695 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 RTKNQ9BST9 563 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 CPVLQ9H3G5 476 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
CAPN3-215ENST00000565559 DZANK1Q9NVP4 752 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 PADI3Q9ULW8 664 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 HCFC2Q9Y5Z7 792 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 KIAA1671Q9BY89 1806 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 FRYLO94915 3013 aa12.87□□□□□ -0.35
CAPN3-215ENST00000565559 FAM208BQ5VWN6 2430 aa12.86□□□□□ -0.35
CAPN3-215ENST00000565559 FGRP09769 529 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms