RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PCDHA4Q9UN74 947 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 ST3GAL5Q9UNP4 418 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 CEP131Q9UPN4 1083 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 AKT3Q9Y243 479 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 MAFBQ9Y5Q3 323 aaPredicted RBP7.25□□□□□ -1.25
TCF4-228ENST00000565393 SCN10AQ9Y5Y9 1956 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 IGSF9BQ9UPX0 1349 aa7.25□□□□□ -1.25
TCF4-228ENST00000565393 COL1A2P08123 1366 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 H3BQ06 376 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 NCK2O43639 380 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 VTNP04004 478 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 ZSCAN20P17040 1043 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 XBP1P17861 261 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 SFNP31947 248 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 SSTR3P32745 418 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 JAK3P52333 1124 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 NONOQ15233 471 aaKnown RBP eCLIP7.24□□□□□ -1.25
TCF4-228ENST00000565393 PUS10Q3MIT2 529 aaKnown RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 LEXMQ3ZCV2 418 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 TIGD5Q53EQ6 642 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 LRCH2Q5VUJ6 765 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 PTCRAQ6ISU1 281 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 SLC24A5Q71RS6 500 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 MIER3Q7Z3K6 550 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 GJA10Q969M2 543 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 ZNF668Q96K58 619 aaPredicted RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 SCLT1Q96NL6 688 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 MAP7D2Q96T17 732 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 OSMRQ99650 979 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 C1QTNF1Q9BXJ1 281 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 TMX1Q9H3N1 280 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 NSUN3Q9H649 340 aaKnown RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 ATP6V0A4Q9HBG4 840 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 ERVK-5Q9HDB9 667 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 RGS18Q9NS28 235 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 C1orf112Q9NSG2 853 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 KCNJ14Q9UNX9 436 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 PLAGL2Q9UPG8 496 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 MRPL42Q9Y6G3 142 aaKnown RBP7.24□□□□□ -1.25
TCF4-228ENST00000565393 ADGRA3Q8IWK6 1321 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 KDM3AQ9Y4C1 1321 aa7.24□□□□□ -1.25
TCF4-228ENST00000565393 RANBP2P49792 3224 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 CCDC194A0A1B0GVG4 234 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 TBKBP1A7MCY6 615 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 ZBTB42B2RXF5 422 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 C5orf67F2Z3F1 127 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 EDIL3O43854 480 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 DTNBO60941 627 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 GPR32O75388 356 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 CDKL5O76039 1030 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 TDP2O95551 362 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 C22orf31O95567 290 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 OATP04181 439 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 COL9A1P20849 921 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 SARSP49591 514 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 GATMP50440 423 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 DNM2P50570 870 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 CLCN3P51790 818 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 TBC1D8BQ0IIM8 1120 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 ANKRD1Q15327 319 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 INF2Q27J81 1249 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 LETM2Q2VYF4 491 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 Q4G0T1 1027 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 FAM102BQ5T8I3 360 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 GALNT17Q6IS24 598 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 FAM43BQ6ZT52 329 aaPredicted RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 KRT25Q7Z3Z0 450 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 RBM23Q86U06 439 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 CMTR2Q8IYT2 770 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 LRRC71Q8N4P6 559 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 KLHL23Q8NBE8 558 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 RNF169Q8NCN4 708 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 TMEM40Q8WWA1 233 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 NLRP7Q8WX94 980 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 LINC01599Q8WXQ3 324 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 SLC5A5Q92911 643 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 CLP1Q92989 425 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 PABPC5Q96DU9 382 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 FAM167AQ96KS9 214 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 AIFM3Q96NN9 605 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 LMAN2LQ9H0V9 348 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 UNC45AQ9H3U1 944 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 EPHX3Q9H6B9 360 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 AAASQ9NRG9 546 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 DDX25Q9UHL0 483 aaKnown RBP7.23□□□□□ -1.25
TCF4-228ENST00000565393 FAM50BQ9Y247 325 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 PCDHB12Q9Y5F1 795 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 SZT2Q5T011 3432 aa7.23□□□□□ -1.25
TCF4-228ENST00000565393 CYP3A7-CYP3A51PA0A087WV96 503 aa7.22□□□□□ -1.25
TCF4-228ENST00000565393 GRXCR2A6NFK2 248 aa7.22□□□□□ -1.25
TCF4-228ENST00000565393 ZNF862O60290 1169 aa7.22□□□□□ -1.25
TCF4-228ENST00000565393 MGEA5O60502 916 aa7.22□□□□□ -1.25
TCF4-228ENST00000565393 CCNT1O60563 726 aaKnown RBP7.22□□□□□ -1.25
TCF4-228ENST00000565393 PSMD10O75832 226 aa7.22□□□□□ -1.25
TCF4-228ENST00000565393 BAG4O95429 457 aaKnown RBP7.22□□□□□ -1.25
TCF4-228ENST00000565393 ITGB1P05556 798 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms