RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 IKBKEQ14164 716 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 EPHA7Q15375 998 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 FAM26DQ5JW98 314 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 TTC38Q5R3I4 469 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 IER5Q5VY09 327 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 FAM109BQ6ICB4 259 aaPredicted RBP11.17□□□□□ -0.62
CDH1-206ENST00000564676 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 NME8Q8N427 588 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 METTL13Q8N6R0 699 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 DBF4BQ8NFT6 615 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 SEPT8Q92599 483 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 SEPT9Q9UHD8 586 aaPredicted RBP11.17□□□□□ -0.62
CDH1-206ENST00000564676 PCDHA12Q9UN75 941 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 CDY2AQ9Y6F7 541 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 MYO9BQ13459 2157 aa11.17□□□□□ -0.62
CDH1-206ENST00000564676 DDX11L8A8MPP1 907 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 ZBTB42B2RXF5 422 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 MAGEB2O15479 319 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 EFCAB14O75071 495 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 P4HBP07237 508 aaKnown RBP11.16□□□□□ -0.62
CDH1-206ENST00000564676 U2AF2P26368 475 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDH1-206ENST00000564676 QARSP47897 775 aaKnown RBP11.16□□□□□ -0.62
CDH1-206ENST00000564676 TRAPPC10P48553 1259 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 CUL4AQ13619 759 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 XKR3Q5GH77 459 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 LARP1BQ659C4 914 aaKnown RBP11.16□□□□□ -0.62
CDH1-206ENST00000564676 Q7L0L9 218 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 DEFB123Q8N688 67 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 MTMR9Q96QG7 549 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 SLC9A7Q96T83 725 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 TMEM60Q9H2L4 133 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 TTC12Q9H892 705 aaPredicted RBP11.16□□□□□ -0.62
CDH1-206ENST00000564676 MSRAQ9UJ68 235 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 GINS2Q9Y248 185 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 TRPV2Q9Y5S1 764 aa11.16□□□□□ -0.62
CDH1-206ENST00000564676 RBAK-RBAKDNI3L0D1 243 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 C22orf31O95567 290 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 GHRP10912 638 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 DNAJB2P25686 324 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 TMOD1P28289 359 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 PBX2P40425 430 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 RABGGTBP53611 331 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 MGAT3Q09327 533 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 TBC1D8BQ0IIM8 1120 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 ORC2Q13416 577 aaPredicted RBP11.15□□□□□ -0.62
CDH1-206ENST00000564676 RAB30Q15771 203 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 TCTN1Q2MV58 587 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 MTERF2Q49AM1 385 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 PLEKHG4Q58EX7 1191 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 EFCAB12Q6NXP0 572 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 KIAA0319LQ8IZA0 1049 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 PHOSPHO2Q8TCD6 241 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 APBB2Q92870 758 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 FAM161BQ96MY7 647 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 MAP7D2Q96T17 732 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 NIFKQ9BYG3 293 aaKnown RBP11.15□□□□□ -0.62
CDH1-206ENST00000564676 PBX4Q9BYU1 374 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 IFIH1Q9BYX4 1025 aaKnown RBP11.15□□□□□ -0.62
CDH1-206ENST00000564676 CELF4Q9BZC1 486 aaKnown RBP11.15□□□□□ -0.62
CDH1-206ENST00000564676 OSBPL7Q9BZF2 842 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 SUGCTQ9HAC7 445 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 RGL1Q9NZL6 768 aa11.15□□□□□ -0.62
CDH1-206ENST00000564676 TMEM150BA6NC51 233 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
CDH1-206ENST00000564676 STBD1O95210 358 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 OR52Z1P0C646 297 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 TECP42680 631 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 CLCN3P51790 818 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 WDR5P61964 334 aaKnown RBP11.14□□□□□ -0.63
CDH1-206ENST00000564676 CYP4A11Q02928 519 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 SPIRE1Q08AE8 756 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 CTTNQ14247 550 aaKnown RBP11.14□□□□□ -0.63
CDH1-206ENST00000564676 NBR1Q14596 966 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 LPIN1Q14693 890 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 FBXO47Q5MNV8 452 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 TPH2Q8IWU9 490 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 LRRC71Q8N4P6 559 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 DYDC2Q96IM9 177 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 PPP1R16BQ96T49 567 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 EIF2AK1Q9BQI3 630 aaKnown RBP11.14□□□□□ -0.63
CDH1-206ENST00000564676 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 LXNQ9BS40 222 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 ZBED2Q9BTP6 218 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 ZSWIM4Q9H7M6 989 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 AKT3Q9Y243 479 aa11.14□□□□□ -0.63
CDH1-206ENST00000564676 SLITRK3O94933 977 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 SLC34A2O95436 690 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 AMHP03971 560 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 VTNP04004 478 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 PDCP20941 246 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 TOB1P50616 345 aaPredicted RBP11.13□□□□□ -0.63
CDH1-206ENST00000564676 DEFB103AP81534 67 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 TARBP2Q15633 366 aaKnown RBP11.13□□□□□ -0.63
CDH1-206ENST00000564676 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
CDH1-206ENST00000564676 RILPL1Q5EBL4 403 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms