RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 DDX39AO00148 427 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 GPR182O15218 404 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 CRYBB1P53674 252 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 COL19A1Q14993 1142 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 PRR16Q569H4 304 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 CCDC60Q8IWA6 550 aaPredicted RBP13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 P2RX5Q93086 422 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 RIT2Q99578 217 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 C1orf112Q9NSG2 853 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 NRBP2Q9NSY0 501 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 FAM50BQ9Y247 325 aa13.8□□□□□ -0.2
GTF3C1-204ENST00000564664 CPLX1O14810 134 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 DEXIO95424 95 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 ATP4AP20648 1035 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 TMOD1P28289 359 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 SFNP31947 248 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 CTNNB1P35222 781 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 NLRP5P59047 1200 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 CCT2P78371 535 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 RDM1Q8NG50 284 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 PCDHA4Q9UN74 947 aa13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 COL4A4P53420 1690 aaPredicted RBP13.79□□□□□ -0.2
GTF3C1-204ENST00000564664 CYP3A7-CYP3A51PA0A087WV96 503 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 ZBTB42B2RXF5 422 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 RPS6KA5O75582 802 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 LINC00271P0C7V0 271 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 CYP3A7P24462 503 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 SARSP49591 514 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 JAK3P52333 1124 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 CDC42EP1Q00587 391 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 TMEM62Q0P6H9 643 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 NFX1Q12986 1120 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 TOB2Q14106 344 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 Q4G0T1 1027 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 NEK9Q8TD19 979 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 LENG9Q96B70 501 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 NECAB3Q96P71 396 aaPredicted RBP13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 ERVK-5Q9HDB9 667 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 DISC1Q9NRI5 854 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 RGS18Q9NS28 235 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 VPS54Q9P1Q0 977 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 GABBR1Q9UBS5 961 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 SAMM50Q9Y512 469 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 PCDHB7Q9Y5E2 793 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 MYH9P35579 1960 aaKnown RBP13.78□□□□□ -0.2
GTF3C1-204ENST00000564664 ADAMTS3O15072 1205 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 MSH4O15457 936 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 EIF5BO60841 1220 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 CDKL5O76039 1030 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 C22orf31O95567 290 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 NEFLP07196 543 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 KCNA5P22460 613 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 FAM189BP81408 668 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 TCEAL5Q5H9L2 206 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 MOXD1Q6UVY6 613 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 SLC24A5Q71RS6 500 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 DAGLBQ8NCG7 672 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 SLC5A5Q92911 643 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 PPP2R3CQ969Q6 453 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 NCOA5Q9HCD5 579 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 PDRG1Q9NUG6 133 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 PLAGL2Q9UPG8 496 aa13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 NOC2LQ9Y3T9 749 aaKnown RBP13.77□□□□□ -0.21
GTF3C1-204ENST00000564664 DENND3A2RUS2 1198 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 GAS7O60861 476 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 GPR32O75388 356 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 MMP1P03956 469 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 PTCRAQ6ISU1 281 aaPredicted RBP13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 BLIDQ8IZY5 108 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 METTL13Q8N6R0 699 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 RASGRP4Q8TDF6 673 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 MAP7D2Q96T17 732 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 TEKT3Q9BXF9 490 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 ELAC1Q9H777 363 aaKnown RBP13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 AAASQ9NRG9 546 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 ST3GAL5Q9UNP4 418 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 GINS2Q9Y248 185 aa13.76□□□□□ -0.21
GTF3C1-204ENST00000564664 MYO7AQ13402 2215 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 EVPLQ92817 2033 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 C9IYK1 514 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 M0R2N6 131 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 GRM6O15303 877 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 EDIL3O43854 480 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 OATP04181 439 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 XBP1P17861 261 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 UBE3AQ05086 875 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
GTF3C1-204ENST00000564664 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms