RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 DYNC1I1O14576 645 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TEX33O43247 280 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 STX10O60499 249 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MFAP3LO75121 409 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KIF20AO95235 890 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KRT18P05783 430 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 CYBAP13498 195 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 EIF2AK2P19525 551 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SETQ01105 290 aaPredicted RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 GOLGA8FQ08AF8 430 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 GOLGA8DPQ0D2H9 430 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 PTPN21Q16825 1174 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 ARHGEF16Q5VV41 709 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 E4F1Q66K89 784 aaPredicted RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 POTEBQ6S5H4 581 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 NYAP1Q6ZVC0 841 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 DYMQ7RTS9 669 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KCNK18Q7Z418 384 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 GPBP1Q86WP2 473 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 CREBRFQ8IUR6 639 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 GUF1Q8N442 669 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KCTD17Q8N5Z5 321 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TC2NQ8N9U0 490 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KIAA0895Q8NCT3 520 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TRPV1Q8NER1 839 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SYTL5Q8TDW5 730 aaPredicted RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 DDX12PQ92771 950 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 GJA10Q969M2 543 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 LENG9Q96B70 501 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FGD4Q96M96 766 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 DEFB118Q96PH6 123 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TAAR1Q96RJ0 339 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MPHOSPH6Q99547 160 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SRRTQ9BXP5 876 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 VPS16Q9H269 839 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TMX1Q9H3N1 280 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TRMT1Q9NXH9 659 aaKnown RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 COL20A1Q9P218 1284 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KIAA1024Q9UPX6 916 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FRMPD3Q5JV73 1810 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SYNGAP1Q96PV0 1343 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 LRRC37A2A6NM11 1700 aa8.23□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MYH11P35749 1972 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 A0A1W2PQC6 194 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 B4DLN1 442 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 E9PMD0 336 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FAM86B1E9PN63 330 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 PES1O00541 588 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MSH4O15457 936 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SNAI1O95863 264 aaPredicted RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TFRCP02786 760 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FAM86B2P0C5J1 330 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 PLA2G4BP0C869 781 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MTIF2P46199 727 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 DNM2P50570 870 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 HSD17B4P51659 736 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 PMS1P54277 932 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 ADKP55263 362 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 UBXN1Q04323 297 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 LRRC63Q05C16 580 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SPIRE1Q08AE8 756 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 STK4Q13043 487 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 COASYQ13057 564 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FAM26FQ5R3K3 315 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FKBP15Q5T1M5 1219 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MAP3K21Q5TCX8 1036 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FOXR2Q6PJQ5 311 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 ZNF467Q7Z7K2 595 aaPredicted RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 TMEM139Q8IV31 216 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 FBXO16Q8IX29 292 aaPredicted RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 MSL3Q8N5Y2 521 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KIF18AQ8NI77 898 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 ZNF592Q92610 1267 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 IQCDQ96DY2 449 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 CNOT6LQ96LI5 555 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 RMDN3Q96TC7 470 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 DUSP9Q99956 384 aaKnown RBP8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 SLC39A2Q9NP94 309 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 PANK4Q9NVE7 773 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 ASTN1O14525 1302 aa8.22□□□□□ -1.09
MAP1LC3B-205ENST00000564638 KIAA1217Q5T5P2 1943 aa8.21□□□□□ -1.09
MAP1LC3B-205ENST00000564638 IGLV3-22A0A075B6J6 115 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RIOK3O14730 519 aaKnown RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 MED24O75448 989 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GJB1P08034 283 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 PRKCSHP14314 528 aaPredicted RBP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 AKR1A1P14550 325 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RPA1P27694 616 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CASP14P31944 242 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 GTF2F1P35269 517 aaKnown RBP eCLIP8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 EHHADHQ08426 723 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 RBL2Q08999 1139 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ACVR2BQ13705 512 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ECM1Q16610 540 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 LRCH2Q5VUJ6 765 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 ANKRD40Q6AI12 368 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 CENPPQ6IPU0 288 aa8.21□□□□□ -1.1
MAP1LC3B-205ENST00000564638 POTEGQ6S5H5 508 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms