RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 CSF2RBP32927 897 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 IL13RA1P78552 427 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 RNF207Q6ZRF8 634 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 ZNF503Q96F45 646 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 DRC1Q96MC2 740 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 KATNBL1Q9H079 304 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 UCKL1Q9NWZ5 548 aa4.62□□□□□ -1.67
CHD9-211ENST00000564600 ESYT3A0FGR9 886 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 DVL2O14641 736 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 PLD2O14939 933 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 GSTA4O15217 222 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 GLRX3O76003 335 aaKnown RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 NAT1P18440 290 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 PTGS1P23219 599 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 MECP2P51608 486 aaKnown RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 NOLC1Q14978 699 aaKnown RBP eCLIP4.61□□□□□ -1.67
CHD9-211ENST00000564600 TMEM177Q53S58 311 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 TAX1BP1Q86VP1 789 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 GIMAP8Q8ND71 665 aaPredicted RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 ASB15Q8WXK1 588 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 DLG3Q92796 817 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 AJUBAQ96IF1 538 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 LMF1Q96S06 567 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 BARX1Q9HBU1 254 aaPredicted RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 ARHGAP28Q9P2N2 729 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 ZFR2Q9UPR6 939 aaKnown RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 TNPO3Q9Y5L0 923 aaKnown RBP4.61□□□□□ -1.67
CHD9-211ENST00000564600 B3GALT1Q9Y5Z6 326 aa4.61□□□□□ -1.67
CHD9-211ENST00000564600 CCDC163A0A0D9SF12 145 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 H0Y858 1186 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 NARSO43776 548 aaKnown RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 CHGBP05060 677 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 C1SP09871 688 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 GJA4P35212 333 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 ADCY8P40145 1251 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 TOP3AQ13472 1001 aaPredicted RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 PRKD1Q15139 912 aaPredicted RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 NFE2L2Q16236 605 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 TBR1Q16650 682 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 C21orf62-AS1Q17RA5 79 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 MIIPQ5JXC2 388 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 CATSPEREQ5SY80 951 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 RALYLQ86SE5 291 aaKnown RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 NEU4Q8WWR8 484 aaPredicted RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 RNPC3Q96LT9 517 aaKnown RBP4.6□□□□□ -1.67
CHD9-211ENST00000564600 INCENPQ9NQS7 918 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 TESMINQ9Y4I5 508 aa4.6□□□□□ -1.67
CHD9-211ENST00000564600 FAM83GA6ND36 823 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 M0R2C6 588 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 TRAF5O00463 557 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 ASMTLO95671 621 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 HERVK_113P62684 666 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 TMEM132BQ14DG7 1078 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 STILQ15468 1287 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 SMN1Q16637 294 aaKnown RBP4.59□□□□□ -1.67
CHD9-211ENST00000564600 KANK2Q63ZY3 851 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 ZCCHC8Q6NZY4 707 aaKnown RBP4.59□□□□□ -1.67
CHD9-211ENST00000564600 EP400NLQ6ZTU2 488 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 LARP4Q71RC2 724 aaKnown RBP eCLIP4.59□□□□□ -1.67
CHD9-211ENST00000564600 OTOP1Q7RTM1 612 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 NPM2Q86SE8 214 aaKnown RBP4.59□□□□□ -1.67
CHD9-211ENST00000564600 FUKQ8N0W3 1084 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 UBXN4Q92575 508 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 MRFAP1L1Q96HT8 127 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 TRIM8Q9BZR9 551 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 KCNH7Q9NS40 1196 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 TMEM260Q9NX78 707 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 GALNT8Q9NY28 637 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 SAMD15Q9P1V8 674 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 CDC42EP3Q9UKI2 254 aa4.59□□□□□ -1.67
CHD9-211ENST00000564600 SLC12A8A0AV02 714 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 PRAMEF22A3QJZ6 481 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 KRT37O76014 449 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 POLD1P28340 1107 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 RRADP55042 308 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 NANOS3P60323 173 aaKnown RBP4.58□□□□□ -1.68
CHD9-211ENST00000564600 IRF9Q00978 393 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 CD83Q01151 205 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 PTH1RQ03431 593 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 ABHD18Q0P651 414 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 RNF151Q2KHN1 245 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 TKFCQ3LXA3 575 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 LSM12Q3MHD2 195 aaKnown RBP4.58□□□□□ -1.68
CHD9-211ENST00000564600 WDR72Q3MJ13 1102 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 FNDC3BQ53EP0 1204 aaKnown RBP4.58□□□□□ -1.68
CHD9-211ENST00000564600 AGBL4Q5VU57 503 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 C2orf69Q8N8R5 385 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 FOXRED1Q96CU9 486 aaPredicted RBP4.58□□□□□ -1.68
CHD9-211ENST00000564600 WNK4Q96J92 1243 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 GBP4Q96PP9 640 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 CEP89Q96ST8 783 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 KIAA1683Q9H0B3 1180 aa4.58□□□□□ -1.68
CHD9-211ENST00000564600 GOLGA6L22H0YM25 854 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 MATN2O00339 956 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 FOXP2O15409 715 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 ECE1P42892 770 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 KCNQ1P51787 676 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 INHBEP58166 350 aa4.57□□□□□ -1.68
CHD9-211ENST00000564600 PABPC4Q13310 644 aaKnown RBP eCLIP4.57□□□□□ -1.68
CHD9-211ENST00000564600 RTN4RL1Q86UN2 441 aaPredicted RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms