RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 RPS6KA5O75582 802 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 EIF3JO75822 258 aaKnown RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 NTRK1P04629 796 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 FAM153BP0C7A2 387 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 YBX3P16989 372 aaKnown RBP eCLIP6.42□□□□□ -1.38
CHD9-210ENST00000564582 MAGEA9P43362 315 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 GNAI1P63096 354 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 TARBP2Q15633 366 aaKnown RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 CHRNA2Q15822 529 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 CCDC144BQ3MJ40 725 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 STYK1Q6J9G0 422 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ATG14Q6ZNE5 492 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ANKLE2Q86XL3 938 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 SUGP1Q8IWZ8 645 aaKnown RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 DRC7Q8IY82 874 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 IFNL3Q8IZI9 196 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 Q8N1Y9 231 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ZSWIM2Q8NEG5 633 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 FBXO18Q8NFZ0 1043 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ERCC4Q92889 916 aaPredicted RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 TMX3Q96JJ7 454 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 CHMP4AQ9BY43 222 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 NAT10Q9H0A0 1025 aaKnown RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 TTC12Q9H892 705 aaPredicted RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 GOLGA2P5Q9HBQ8 144 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 CLDND1Q9NY35 253 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 MBD1Q9UIS9 605 aaPredicted RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 NOB1Q9ULX3 412 aaKnown RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 AOX1Q06278 1338 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ZNF644Q9H582 1327 aaPredicted RBP6.42□□□□□ -1.38
CHD9-210ENST00000564582 IQGAP3Q86VI3 1631 aa6.42□□□□□ -1.38
CHD9-210ENST00000564582 ZNF518AQ6AHZ1 1483 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 KIAA0556O60303 1618 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 GOLGA6L4A6NEF3 574 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 GOLGA6L19H0YKK7 550 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 ARNTLO00327 626 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 N4BP3O15049 544 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 ZSCAN22P10073 491 aaPredicted RBP6.41□□□□□ -1.38
CHD9-210ENST00000564582 LCP1P13796 627 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 H2AFXP16104 143 aaPredicted RBP6.41□□□□□ -1.38
CHD9-210ENST00000564582 PFKLP17858 780 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 NAT1P18440 290 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 FPR2P25090 351 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 HNRNPH2P55795 449 aaKnown RBP6.41□□□□□ -1.38
CHD9-210ENST00000564582 PRR5P85299 388 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 KIZQ2M2Z5 673 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 ATL3Q6DD88 541 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 MAMDC2Q7Z304 686 aaPredicted RBP6.41□□□□□ -1.38
CHD9-210ENST00000564582 TMEM57Q8N5G2 664 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 CCDC150Q8NCX0 1101 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.41□□□□□ -1.38
CHD9-210ENST00000564582 SSH1Q8WYL5 1049 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 SEC14L1Q92503 715 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 RTF1Q92541 710 aaKnown RBP6.41□□□□□ -1.38
CHD9-210ENST00000564582 TSPAN17Q96FV3 270 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 DHRS4Q9BTZ2 278 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 L2HGDHQ9H9P8 463 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 MED4Q9NPJ6 270 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 FBLN5Q9UBX5 448 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 ZDHHC9Q9Y397 364 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 CEP83Q9Y592 693 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 X6R8D5 127 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 RGS12O14924 1447 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 PTCH1Q13635 1447 aa6.41□□□□□ -1.38
CHD9-210ENST00000564582 EFCAB8A8MWE9 144 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 RFXAPO00287 272 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 AQP7O14520 342 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 DHX16O60231 1041 aaKnown RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 ERLIN1O75477 346 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 DGKIO75912 1065 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 CCDC172P0C7W6 258 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 MCM3P25205 808 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 SLC6A11P48066 632 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 NEK4P51957 841 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 GPR85P60893 370 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 KRT85P78386 507 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 ZNF200P98182 395 aaPredicted RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 EXOSC9Q06265 439 aaKnown RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 ZNF124Q15973 351 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 ZSCAN26Q16670 478 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 TTC31Q49AM3 519 aaPredicted RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 C2orf27AQ580R0 203 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 FAM209AQ5JX71 171 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 CCDC158Q5M9N0 1113 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 LDHDQ86WU2 507 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 SPATS2Q86XZ4 545 aaKnown RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 TDRD7Q8NHU6 1098 aaKnown RBP6.4□□□□□ -1.38
CHD9-210ENST00000564582 MZB1Q8WU39 189 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 ALG3Q92685 438 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 ALG1Q9BT22 464 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 FUCA2Q9BTY2 467 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 TRIM5Q9C035 493 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 EPB41L1Q9H4G0 881 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 CNTD2Q9H8S5 307 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 RSPH14Q9UHP6 348 aa6.4□□□□□ -1.38
CHD9-210ENST00000564582 MRPS23Q9Y3D9 190 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms