RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 EIF2AK1Q9BQI3 630 aaKnown RBP19.42■□□□□ 0.7
USB1-209ENST00000564387 OSBPL7Q9BZF2 842 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 ZSWIM4Q9H7M6 989 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 RGL1Q9NZL6 768 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 PPME1Q9Y570 386 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 SQORQ9Y6N5 450 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 KDM3AQ9Y4C1 1321 aa19.42■□□□□ 0.7
USB1-209ENST00000564387 SIP14410 1827 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 IGKV6-21A0A0C4DH24 114 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 SOX1O00570 391 aaPredicted RBP19.41■□□□□ 0.7
USB1-209ENST00000564387 BAIAP3O94812 1187 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 PDIA5Q14554 519 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 GPR153Q6NV75 609 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 CNKSR3Q6P9H4 555 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 DYDC2Q96IM9 177 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 LXNQ9BS40 222 aa19.41■□□□□ 0.7
USB1-209ENST00000564387 CXXC1Q9P0U4 656 aaPredicted RBP19.41■□□□□ 0.7
USB1-209ENST00000564387 POTEMA6NI47 508 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 SPATA31C1P0DKV0 1188 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 MRPS6P82932 125 aaKnown RBP19.4■□□□□ 0.7
USB1-209ENST00000564387 SMAD3P84022 425 aaKnown RBP19.4■□□□□ 0.7
USB1-209ENST00000564387 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
USB1-209ENST00000564387 TCTN1Q2MV58 587 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 IER5Q5VY09 327 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 OTOP2Q7RTS6 562 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 IGSF22Q8N9C0 903 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 MTIF3Q9H2K0 278 aaKnown RBP19.4■□□□□ 0.7
USB1-209ENST00000564387 MTMR6Q9Y217 621 aa19.4■□□□□ 0.7
USB1-209ENST00000564387 EVPLQ92817 2033 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 TMEM150BA6NC51 233 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 DDX11L8A8MPP1 907 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 CTSHP09668 335 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 ACTN1P12814 892 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 PDIA4P13667 645 aaKnown RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 TECP42680 631 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 RESTQ13127 1097 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 IL17AQ16552 155 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 TRMT1LQ7Z2T5 733 aaKnown RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 ZNF710Q8N1W2 664 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 POLR3CQ9BUI4 534 aaPredicted RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 CELF4Q9BZC1 486 aaKnown RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 FAM49AQ9H0Q0 323 aaPredicted RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 TUFT1Q9NNX1 390 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 SEPT9Q9UHD8 586 aaPredicted RBP19.39■□□□□ 0.69
USB1-209ENST00000564387 CDY2AQ9Y6F7 541 aa19.39■□□□□ 0.69
USB1-209ENST00000564387 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 ABHD14A-ACY1A0A1B0GW23 586 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 VPS37CA5D8V6 355 aaPredicted RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 STX6O43752 255 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 MAFO75444 373 aaPredicted RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 XRCC6P12956 609 aaKnown RBP eCLIP19.38■□□□□ 0.69
USB1-209ENST00000564387 MUTP22033 750 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 RPA1P27694 616 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 CTTNQ14247 550 aaKnown RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 LPIN1Q14693 890 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 FBXO47Q5MNV8 452 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 SZT2Q5T011 3432 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 EFCAB12Q6NXP0 572 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 FAM43BQ6ZT52 329 aaPredicted RBP19.38■□□□□ 0.69
USB1-209ENST00000564387 USP38Q8NB14 1042 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 DBF4BQ8NFT6 615 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 FTOQ9C0B1 505 aaKnown RBP eCLIP19.38■□□□□ 0.69
USB1-209ENST00000564387 CYP26B1Q9NR63 512 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 FOXD4L1Q9NU39 408 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 TRPV2Q9Y5S1 764 aa19.38■□□□□ 0.69
USB1-209ENST00000564387 GPR32O75388 356 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 CYP4A11Q02928 519 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 TBC1D8BQ0IIM8 1120 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 MTERF2Q49AM1 385 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 ARL6IP4Q66PJ3 421 aaKnown RBP19.37■□□□□ 0.69
USB1-209ENST00000564387 OTUD6AQ7L8S5 288 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 FERMT3Q86UX7 667 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 CATSPER3Q86XQ3 398 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 TPH2Q8IWU9 490 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 PHOSPHO2Q8TCD6 241 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 DHX33Q9H6R0 707 aaKnown RBP19.37■□□□□ 0.69
USB1-209ENST00000564387 ANKEF1Q9NU02 776 aa19.37■□□□□ 0.69
USB1-209ENST00000564387 ZBTB39O15060 712 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 EFCAB14O75071 495 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 MED24O75448 989 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 TMOD1P28289 359 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 NPEPPSP55786 919 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 TMEM266Q2M3C6 531 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 PLA2G4FQ68DD2 849 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 FAM109BQ6ICB4 259 aaPredicted RBP19.36■□□□□ 0.69
USB1-209ENST00000564387 EXOC8Q8IYI6 725 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 ZNF579Q8NAF0 562 aaKnown RBP19.36■□□□□ 0.69
USB1-209ENST00000564387 SEPT8Q92599 483 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 APBB2Q92870 758 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 LRCH3Q96II8 777 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 SLC4A7Q9Y6M7 1214 aa19.36■□□□□ 0.69
USB1-209ENST00000564387 M0QZ92 97 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 BMP15O95972 392 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 RFC5P40937 340 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 CLCN3P51790 818 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 CRYBB1P53674 252 aaPredicted RBP19.35■□□□□ 0.69
USB1-209ENST00000564387 IKBKEQ14164 716 aa19.35■□□□□ 0.69
USB1-209ENST00000564387 DTHD1Q6ZMT9 781 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms