RNA–Protein interactions for RNA: ENST00000564286.1

CFDP1-203, Transcript of craniofacial development protein 1, humanhuman

TSL 5

Gene CFDP1, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-203ENST00000564286 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
CFDP1-203ENST00000564286 CELF4Q9BZC1 486 aaKnown RBP12.25□□□□□ -0.45
CFDP1-203ENST00000564286 IRF2BPLQ9H1B7 796 aa12.25□□□□□ -0.45
CFDP1-203ENST00000564286 JPH1Q9HDC5 661 aaPredicted RBP12.25□□□□□ -0.45
CFDP1-203ENST00000564286 CLEC1BQ9P126 229 aa12.25□□□□□ -0.45
CFDP1-203ENST00000564286 SLC9A2Q9UBY0 812 aa12.25□□□□□ -0.45
CFDP1-203ENST00000564286 DENND3A2RUS2 1198 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 LOC730098B7Z3J9 87 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 CALM1P0DP23 149 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 CALM2P0DP24 149 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 CALM3P0DP25 149 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 KRT76Q01546 638 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 PTH1RQ03431 593 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 UBE3AQ05086 875 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 TMEM62Q0P6H9 643 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 NFX1Q12986 1120 aaKnown RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 RALGAPA2Q2PPJ7 1873 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 PDE12Q6L8Q7 609 aaKnown RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 RTN4RL1Q86UN2 441 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 FBXL6Q8N531 539 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 LINC01599Q8WXQ3 324 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 RPGRIP1Q96KN7 1286 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 CDCA3Q99618 268 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 PHF7Q9BWX1 381 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 IL25Q9H293 177 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 JADE2Q9NQC1 790 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 USP15Q9Y4E8 981 aaPredicted RBP12.24□□□□□ -0.45
CFDP1-203ENST00000564286 PCDHA2Q9Y5H9 948 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 UBIAD1Q9Y5Z9 338 aa12.24□□□□□ -0.45
CFDP1-203ENST00000564286 IGSF9BQ9UPX0 1349 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 SMIM35A0A1B0GVV1 85 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 SARSP49591 514 aaKnown RBP12.23□□□□□ -0.45
CFDP1-203ENST00000564286 STAT5BP51692 787 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 PLPPR4Q7Z2D5 763 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 ZBTB33Q86T24 672 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 PRSS33Q8NF86 280 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 ZBTB10Q96DT7 871 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 NEK1Q96PY6 1258 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 MTA3Q9BTC8 594 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 GINS2Q9Y248 185 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
CFDP1-203ENST00000564286 TBKBP1A7MCY6 615 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 PER2O15055 1255 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 RPS6KA5O75582 802 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 ATF7P17544 494 aaPredicted RBP12.22□□□□□ -0.45
CFDP1-203ENST00000564286 SLC26A2P50443 739 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 ACTR2P61160 394 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 SIGLEC14Q08ET2 396 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 CBX2Q14781 532 aaPredicted RBP12.22□□□□□ -0.45
CFDP1-203ENST00000564286 PLCB4Q15147 1175 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 UBE2SQ16763 222 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 TTC22Q5TAA0 569 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 THNSL1Q8IYQ7 743 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 SRBD1Q8N5C6 995 aaKnown RBP12.22□□□□□ -0.45
CFDP1-203ENST00000564286 LY9Q9HBG7 655 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 TLR9Q9NR96 1032 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 KCNH7Q9NS40 1196 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 TMEM260Q9NX78 707 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 PUF60Q9UHX1 559 aaKnown RBP12.22□□□□□ -0.45
CFDP1-203ENST00000564286 NLRC5Q86WI3 1866 aa12.22□□□□□ -0.45
CFDP1-203ENST00000564286 KDM3AQ9Y4C1 1321 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 GPR182O15218 404 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 PRC1O43663 620 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 PLEKHA8P1O95397 391 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 GLP2RO95838 553 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 CHMLP26374 656 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 KLRC1P26715 233 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 MCM5P33992 734 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 GATMP50440 423 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 ANTXR2P58335 489 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 FAM160B1Q5W0V3 765 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 SLC24A5Q71RS6 500 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 HEATR3Q7Z4Q2 680 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 MB21D2Q8IYB1 491 aaPredicted RBP12.21□□□□□ -0.45
CFDP1-203ENST00000564286 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.45
CFDP1-203ENST00000564286 CCDC82Q8N4S0 544 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 TRAPPC12Q8WVT3 735 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 TMEM87BQ96K49 555 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 PCYT2Q99447 389 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 PHOX2BQ99453 314 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 ADAM2Q99965 735 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 SLC12A7Q9Y666 1083 aa12.21□□□□□ -0.45
CFDP1-203ENST00000564286 NFASCO94856 1347 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 BACH1O14867 736 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 HBP1O60381 514 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 FGF18O76093 207 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 LAG3P18627 525 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 ZNF76P36508 570 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 DUSP6Q16828 381 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 SYNE3Q6ZMZ3 975 aa12.2□□□□□ -0.46
CFDP1-203ENST00000564286 SPRYD3Q8NCJ5 442 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms