RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 UHRF1Q96T88 793 aaPredicted RBP19.98■□□□□ 0.79
NME3-205ENST00000563854 FTHL17Q9BXU8 183 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 UNC45AQ9H3U1 944 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 DISC1Q9NRI5 854 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 LMCD1Q9NZU5 365 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 TPCN1Q9ULQ1 816 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 COG5Q9UP83 839 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 NLRC5Q86WI3 1866 aa19.98■□□□□ 0.79
NME3-205ENST00000563854 COL4A6Q14031 1691 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 CSPG5O95196 566 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 C22orf31O95567 290 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 VTNP04004 478 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 AK2P54819 239 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 BTG3Q14201 252 aaPredicted RBP19.97■□□□□ 0.79
NME3-205ENST00000563854 NONOQ15233 471 aaKnown RBP eCLIP19.97■□□□□ 0.79
NME3-205ENST00000563854 PTPROQ16827 1216 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 KIZQ2M2Z5 673 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 KIAA0319LQ8IZA0 1049 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 DAGLBQ8NCG7 672 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 SLC5A5Q92911 643 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 FAM167AQ96KS9 214 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 NECAB3Q96P71 396 aaPredicted RBP19.97■□□□□ 0.79
NME3-205ENST00000563854 CDHR5Q9HBB8 845 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 SQORQ9Y6N5 450 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 LOXHD1Q8IVV2 1947 aa19.97■□□□□ 0.79
NME3-205ENST00000563854 TTC28Q96AY4 2481 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 TNFRSF10AO00220 468 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 RPS6KA5O75582 802 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 CLCN3P51790 818 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 PRKCEQ02156 737 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 UGCGQ16739 394 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 INF2Q27J81 1249 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 PAN2Q504Q3 1202 aaKnown RBP19.96■□□□□ 0.79
NME3-205ENST00000563854 MIER3Q7Z3K6 550 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 KRT25Q7Z3Z0 450 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 RIT2Q99578 217 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 OSMRQ99650 979 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 LRFN2Q9ULH4 789 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 CEP131Q9UPN4 1083 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 AKT3Q9Y243 479 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 NOC2LQ9Y3T9 749 aaKnown RBP19.96■□□□□ 0.79
NME3-205ENST00000563854 KDM3AQ9Y4C1 1321 aa19.96■□□□□ 0.79
NME3-205ENST00000563854 MYH9P35579 1960 aaKnown RBP19.95■□□□□ 0.78
NME3-205ENST00000563854 XIRP2A4UGR9 3374 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 CCDC194A0A1B0GVG4 234 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 H3BNC9 293 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 PFKFB2O60825 505 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 OATP04181 439 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 XBP1P17861 261 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 JAK3P52333 1124 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 ANAPC15P60006 121 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 ANKRD1Q15327 319 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 NPY5RQ15761 445 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 LETM2Q2VYF4 491 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 Q4G0T1 1027 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 GALNT17Q6IS24 598 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 RTN4RL1Q86UN2 441 aaPredicted RBP19.95■□□□□ 0.78
NME3-205ENST00000563854 NPAS4Q8IUM7 802 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 LRRC71Q8N4P6 559 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 TMEM40Q8WWA1 233 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 MRPL38Q96DV4 380 aaKnown RBP19.95■□□□□ 0.78
NME3-205ENST00000563854 TMX1Q9H3N1 280 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 GJB4Q9NTQ9 266 aa19.95■□□□□ 0.78
NME3-205ENST00000563854 RALGAPA2Q2PPJ7 1873 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 DENND3A2RUS2 1198 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 M0R2N6 131 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 ZNF862O60290 1169 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 CENPBP07199 599 aaPredicted RBP19.94■□□□□ 0.78
NME3-205ENST00000563854 STAG3L1P0CL83 205 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 SFNP31947 248 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 NECAB1Q8N987 351 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 ZNF668Q96K58 619 aaPredicted RBP19.94■□□□□ 0.78
NME3-205ENST00000563854 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 ERVK-5Q9HDB9 667 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 NRBP2Q9NSY0 501 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 DDX25Q9UHL0 483 aaKnown RBP19.94■□□□□ 0.78
NME3-205ENST00000563854 STK36Q9NRP7 1315 aa19.94■□□□□ 0.78
NME3-205ENST00000563854 TCF20Q9UGU0 1960 aaKnown RBP19.94■□□□□ 0.78
NME3-205ENST00000563854 PSMD10O75832 226 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 DGKIO75912 1065 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 BMP1P13497 986 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 GATMP50440 423 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 TIGD5Q53EQ6 642 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 EFCAB12Q6NXP0 572 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 EP400NLQ6ZTU2 488 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 SCLT1Q96NL6 688 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 PHF20Q9BVI0 1012 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 RC3H2Q9HBD1 1191 aaKnown RBP19.93■□□□□ 0.78
NME3-205ENST00000563854 ORC3Q9UBD5 711 aaPredicted RBP19.93■□□□□ 0.78
NME3-205ENST00000563854 SEPT9Q9UHD8 586 aaPredicted RBP19.93■□□□□ 0.78
NME3-205ENST00000563854 RWDD3Q9Y3V2 267 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 EVPLQ92817 2033 aa19.93■□□□□ 0.78
NME3-205ENST00000563854 MAGEB2O15479 319 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 SLC37A4O43826 429 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 MGEA5O60502 916 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 TMOD1P28289 359 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 BMPR1AP36894 532 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 FOSBP53539 338 aa19.92■□□□□ 0.78
NME3-205ENST00000563854 CRYBB1P53674 252 aaPredicted RBP19.92■□□□□ 0.78
NME3-205ENST00000563854 ODR4Q5SWX8 454 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms