RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 EP400NLQ6ZTU2 488 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 SMC1BQ8NDV3 1235 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 CHST13Q8NET6 341 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 ZSWIM3Q96MP5 696 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 WRNIP1Q96S55 665 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 PPP4R1LQ9P1A2 415 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 CROTQ9UKG9 612 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 ZKSCAN5Q9Y2L8 839 aa4.56□□□□□ -1.68
SHCBP1-202ENST00000563219 DVL2O14641 736 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 KCNK3O14649 394 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 GAS7O60861 476 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 EYA4O95677 639 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 ATP2A2P16615 1042 aaKnown RBP4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 SDHAP31040 664 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 LSSP48449 732 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 PPP2CBP62714 309 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 PPP2CAP67775 309 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 AMPD3Q01432 767 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 PTPROQ16827 1216 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 BTBD8Q5XKL5 378 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 CC2D1AQ6P1N0 951 aaPredicted RBP4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 STRA8Q7Z7C7 330 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 PROSER1Q86XN7 944 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 NXPE1Q8N323 547 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 ZCRB1Q8TBF4 217 aaKnown RBP4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 ZCCHC14Q8WYQ9 949 aaKnown RBP4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 DVL3Q92997 716 aaPredicted RBP4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 KCNH7Q9NS40 1196 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 OXSMQ9NWU1 459 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 FTSJ1Q9UET6 329 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 COL4A3BPQ9Y5P4 624 aa4.55□□□□□ -1.68
SHCBP1-202ENST00000563219 hCG_2014768A0A024R1R8 64 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 NPEPPSL1A6NEC2 478 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 H7C1D1 291 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 SCDO00767 359 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 MATN3O15232 486 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 ZEB2O60315 1214 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 HIP1RO75146 1068 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 CNGA1P29973 690 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 GRIN1Q05586 938 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 SART3Q15020 963 aaKnown RBP4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 CT47A1Q5JQC4 288 aaPredicted RBP4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 TMC5Q6UXY8 1006 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 KBTBD2Q8IY47 623 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 KLHL36Q8N4N3 616 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 EFHBQ8N7U6 833 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 UBR7Q8N806 425 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 IGDCC4Q8TDY8 1250 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 CHTF18Q8WVB6 975 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 PCDH12Q9NPG4 1184 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 RIC8BQ9NVN3 520 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 RBPJLQ9UBG7 517 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 ST6GALNAC2Q9UJ37 374 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 SPO11Q9Y5K1 396 aa4.54□□□□□ -1.68
SHCBP1-202ENST00000563219 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 BRINP1O60477 761 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 B4GALT4O60513 344 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 COL6A1P12109 1028 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 CPEP16870 476 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 ADCYAP1R1P41586 468 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 EPHB4P54760 987 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 ZXDAP98168 799 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 OCRLQ01968 901 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 DBPQ10586 325 aaPredicted RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 NFATC3Q12968 1075 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 STRN3Q13033 797 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 CD276Q5ZPR3 534 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 TRMT10BQ6PF06 316 aaKnown RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 ARHGEF18Q6ZSZ5 1173 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 KIAA1958Q8N8K9 716 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 DTX3Q8N9I9 347 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 USP7Q93009 1102 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 SCYL1Q96KG9 808 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 TTC1Q99614 292 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 FAM126AQ9BYI3 521 aaPredicted RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 IFT22Q9H7X7 185 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 BARX1Q9HBU1 254 aaPredicted RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 ACSS2Q9NR19 701 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 THG1LQ9NWX6 298 aaKnown RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 APOBEC2Q9Y235 224 aaKnown RBP4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 ZDHHC9Q9Y397 364 aa4.53□□□□□ -1.68
SHCBP1-202ENST00000563219 NEMP1O14524 444 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 FOXP2O15409 715 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 GPR42O15529 346 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 KRT37O76014 449 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 FKBP9O95302 570 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 CHGBP05060 677 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 CYP17A1P05093 508 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 IBSPP21815 317 aaPredicted RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 AOAHP28039 575 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 FNTBP49356 437 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 KPNA1P52294 538 aaPredicted RBP4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 KIF11P52732 1056 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 IL2P60568 153 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 IGBP1P78318 339 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ICAM4Q14773 271 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 ZNF174Q15697 407 aa4.52□□□□□ -1.69
SHCBP1-202ENST00000563219 CATSPEREQ5SY80 951 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms