RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 KATNBL1Q9H079 304 aa4.19□□□□□ -1.74
CHD9-207ENST00000562806 OXSMQ9NWU1 459 aa4.19□□□□□ -1.74
CHD9-207ENST00000562806 WASF3Q9UPY6 502 aa4.19□□□□□ -1.74
CHD9-207ENST00000562806 A0A087X0B3 334 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 UBA6A0AVT1 1052 aaPredicted RBP4.18□□□□□ -1.74
CHD9-207ENST00000562806 PRAMEF22A3QJZ6 481 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 BRINP1O60477 761 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 IL18BPO95998 194 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 LSP1P33241 339 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 ETV4P43268 484 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 CTSWP56202 376 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 BCAR1P56945 870 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 PHC1P78364 1004 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 NFIXQ14938 502 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 SEC23AQ15436 765 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 CT47A1Q5JQC4 288 aaPredicted RBP4.18□□□□□ -1.74
CHD9-207ENST00000562806 UBXN11Q5T124 520 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 RNF187Q5TA31 235 aaPredicted RBP4.18□□□□□ -1.74
CHD9-207ENST00000562806 EGFLAMQ63HQ2 1017 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 RALYLQ86SE5 291 aaKnown RBP4.18□□□□□ -1.74
CHD9-207ENST00000562806 CXorf38Q8TB03 319 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 USP7Q93009 1102 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 LPPQ93052 612 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 MAML3Q96JK9 1138 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 SYT3Q9BQG1 590 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 UCKL1Q9NWZ5 548 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 RBPJLQ9UBG7 517 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 KCNG1Q9UIX4 513 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 SYNPO2Q9UMS6 1093 aa4.18□□□□□ -1.74
CHD9-207ENST00000562806 A0A0G2JNJ9 132 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 OTOL1A6NHN0 477 aaPredicted RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 ULK1O75385 1050 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 MPIG6BO95866 241 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 ATP2A2P16615 1042 aaKnown RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 HOXA5P20719 270 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 STAT3P40763 770 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 IL2P60568 153 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 IL13RA1P78552 427 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 TOP3AQ13472 1001 aaPredicted RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 USP10Q14694 798 aaKnown RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 RTP5Q14D33 572 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 EIF4HQ15056 248 aaKnown RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 GRAMD4Q6IC98 578 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 ARHGEF18Q6ZSZ5 1173 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 OTOP2Q7RTS6 562 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 KRT26Q7Z3Y9 468 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 RTN4RL1Q86UN2 441 aaPredicted RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 KRTAP1-3Q8IUG1 177 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 C7orf31Q8N865 590 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 SMC1BQ8NDV3 1235 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 FEZF2Q8TBJ5 459 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 LEO1Q8WVC0 666 aaPredicted RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 FOXRED1Q96CU9 486 aaPredicted RBP4.17□□□□□ -1.74
CHD9-207ENST00000562806 C16orf92Q96LL3 132 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 TTC1Q99614 292 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 WNT8AQ9H1J5 351 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 IFT22Q9H7X7 185 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 TOMM22Q9NS69 142 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 Q9UFV3 132 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 VWA7Q9Y334 891 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 ZDHHC9Q9Y397 364 aa4.17□□□□□ -1.74
CHD9-207ENST00000562806 CADPSQ9ULU8 1353 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 ARID1BQ8NFD5 2236 aaPredicted RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 FAM83GA6ND36 823 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 RASSF10A6NK89 507 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 DVL2O14641 736 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 FKBP9O95302 570 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 VIL1P09327 827 aaKnown RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 SLC9A1P19634 815 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 MC4RP32245 332 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 MASP1P48740 699 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 MEOX1P50221 254 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 PPP2CBP62714 309 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 PPP2CAP67775 309 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 PCBP1Q15365 356 aaKnown RBP eCLIP4.16□□□□□ -1.74
CHD9-207ENST00000562806 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 TMEM200BQ69YZ2 307 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 SLFN12LQ6IEE8 588 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 FKBP9P1Q75LS8 142 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 THNSL2Q86YJ6 484 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 KBTBD2Q8IY47 623 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 ZNF610Q8N9Z0 462 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 NUDT10Q8NFP7 164 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 ERCC4Q92889 916 aaPredicted RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 RELTQ969Z4 430 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 MBD6Q96DN6 1003 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 NUDT11Q96G61 164 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 TUBGCP5Q96RT8 1024 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 ELF4Q99607 663 aaPredicted RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 AMNQ9BXJ7 453 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 ZDHHC5Q9C0B5 715 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 SEC61A2Q9H9S3 476 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 THG1LQ9NWX6 298 aaKnown RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 KCMF1Q9P0J7 381 aa4.16□□□□□ -1.74
CHD9-207ENST00000562806 APOBEC2Q9Y235 224 aaKnown RBP4.16□□□□□ -1.74
CHD9-207ENST00000562806 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.15□□□□□ -1.75
CHD9-207ENST00000562806 LAMTOR5O43504 91 aa4.15□□□□□ -1.75
CHD9-207ENST00000562806 RAB11FIP3O75154 756 aa4.15□□□□□ -1.75
CHD9-207ENST00000562806 H2AFYO75367 372 aaKnown RBP4.15□□□□□ -1.75
CHD9-207ENST00000562806 PLATP00750 562 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms