RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 PEX10O60683 326 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 DBPQ10586 325 aaPredicted RBP7.5□□□□□ -1.21
CHD9-205ENST00000562785 CR1LQ2VPA4 569 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 RGL3Q3MIN7 710 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 RTN4RL1Q86UN2 441 aaPredicted RBP7.5□□□□□ -1.21
CHD9-205ENST00000562785 PROSER1Q86XN7 944 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 CBARPQ8N350 705 aaPredicted RBP7.5□□□□□ -1.21
CHD9-205ENST00000562785 Q8N3U1 123 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 FOXRED1Q96CU9 486 aaPredicted RBP7.5□□□□□ -1.21
CHD9-205ENST00000562785 GBP4Q96PP9 640 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 MS4A5Q9H3V2 200 aa7.5□□□□□ -1.21
CHD9-205ENST00000562785 USP36Q9P275 1121 aaKnown RBP7.5□□□□□ -1.21
CHD9-205ENST00000562785 CCNB3Q8WWL7 1395 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHD9-205ENST00000562785 NCAM1P13591 858 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 STAT5AP42229 794 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 IRAK1P51617 712 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 SRSF3P84103 164 aaKnown RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 CACNB2Q08289 660 aaPredicted RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 ADCY1Q08828 1119 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 TTF1Q15361 905 aaPredicted RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 INAVAQ3KP66 663 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 FRMD7Q6ZUT3 714 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 ZC3H18Q86VM9 953 aaKnown RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 JDP2Q8WYK2 163 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 SMAD5Q99717 465 aaKnown RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 TOPORSQ9NS56 1045 aaPredicted RBP7.49□□□□□ -1.21
CHD9-205ENST00000562785 C14orf119Q9NWQ9 140 aa7.49□□□□□ -1.21
CHD9-205ENST00000562785 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.49□□□□□ -1.21
CHD9-205ENST00000562785 MYOCOSA0A1B0GUC4 107 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 GOLGA6L22H0YM25 854 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 KDM1AO60341 852 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 FBXO21O94952 628 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 C8BP07358 591 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 TMEM253P0C7T8 217 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 THBS2P35442 1172 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 NEK2P51955 445 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 EPHB1P54762 984 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 NKX3-2P78367 333 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 KLF1Q13351 362 aaPredicted RBP7.48□□□□□ -1.21
CHD9-205ENST00000562785 FGD6Q6ZV73 1430 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 CILP2Q8IUL8 1156 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 RTF1Q92541 710 aaKnown RBP7.48□□□□□ -1.21
CHD9-205ENST00000562785 E2F7Q96AV8 911 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 DDX11Q96FC9 970 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 MIA2Q96PC5 1412 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 EPB41L4BQ9H329 900 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 NSUN3Q9H649 340 aaKnown RBP7.48□□□□□ -1.21
CHD9-205ENST00000562785 FAM53CQ9NYF3 392 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 G3BP2Q9UN86 482 aaKnown RBP7.48□□□□□ -1.21
CHD9-205ENST00000562785 NOC2LQ9Y3T9 749 aaKnown RBP7.48□□□□□ -1.21
CHD9-205ENST00000562785 SPEF1Q9Y4P9 236 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 PREX2Q70Z35 1606 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 PTPN23Q9H3S7 1636 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 ATP10BO94823 1461 aa7.48□□□□□ -1.21
CHD9-205ENST00000562785 LCHNA4D1U4 455 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 ZNF839A8K0R7 811 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 MCL1Q07820 350 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 PHYKPLQ8IUZ5 450 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 FAM26EQ8N5C1 309 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 HIPK4Q8NE63 616 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 DIRC2Q96SL1 478 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 PCGF6Q9BYE7 350 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 CNTD2Q9H8S5 307 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 SIRT5Q9NXA8 310 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 ARHGAP28Q9P2N2 729 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
CHD9-205ENST00000562785 MSRAQ9UJ68 235 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 PCDHA5Q9Y5H7 936 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.47□□□□□ -1.21
CHD9-205ENST00000562785 RIMBP3CA6NJZ7 1639 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 RIMBP3BA6NNM3 1639 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 RIMBP3Q9UFD9 1639 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 TCOF1Q13428 1488 aaKnown RBP7.47□□□□□ -1.21
CHD9-205ENST00000562785 TTBK1Q5TCY1 1321 aaPredicted RBP7.47□□□□□ -1.21
CHD9-205ENST00000562785 WASHC2AQ641Q2 1341 aa7.47□□□□□ -1.21
CHD9-205ENST00000562785 LOC100996750A0A140TA64 210 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 TEX51A0A1B0GUA7 166 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 UBA6A0AVT1 1052 aaPredicted RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 MPIG6BO95866 241 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 PTGS1P23219 599 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 MC4RP32245 332 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 IARSP41252 1262 aaKnown RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 MOGSQ13724 837 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 TARBP2Q15633 366 aaKnown RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 VASNQ6EMK4 673 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 CD300LDQ6UXZ3 194 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 LIPIQ6XZB0 460 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 PRR23BQ6ZRT6 265 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 LDHDQ86WU2 507 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 C7orf31Q8N865 590 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 LMBR1Q8WVP7 490 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 ERCC4Q92889 916 aaPredicted RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 CHMP4CQ96CF2 233 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 ZNF496Q96IT1 587 aaPredicted RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 FOXB1Q99853 325 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 KRTAP4-6Q9BYQ5 205 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 MCOLN1Q9GZU1 580 aa7.46□□□□□ -1.22
CHD9-205ENST00000562785 DCP1AQ9NPI6 582 aaPredicted RBP7.46□□□□□ -1.22
CHD9-205ENST00000562785 WASF3Q9UPY6 502 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms