RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 PCBP4P57723 403 aaKnown RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 CCT2P78371 535 aaKnown RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 STK3Q13188 491 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 CCINQ13939 588 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 TOB2Q14106 344 aaPredicted RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 LRRC41Q15345 812 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 TMTC3Q6ZXV5 915 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 NECAB2Q7Z6G3 386 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 FCHSD1Q86WN1 690 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 MCF2L2Q86YR7 1114 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 MSL3Q8N5Y2 521 aaKnown RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 SYTL5Q8TDW5 730 aaPredicted RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 SLC30A3Q99726 388 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 LZTS2Q9BRK4 669 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 SPZ1Q9BXG8 430 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 SENP6Q9GZR1 1112 aaPredicted RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 SAP130Q9H0E3 1048 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 ABHD16BQ9H3Z7 469 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 XPNPEP3Q9NQH7 507 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 SEC63Q9UGP8 760 aaKnown RBP6.69□□□□□ -1.34
CDH13-206ENST00000562601 NRBP1Q9UHY1 535 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 PNMA2Q9UL42 364 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 FAM184BQ9ULE4 1060 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 CYP46A1Q9Y6A2 500 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 KIAA1217Q5T5P2 1943 aa6.69□□□□□ -1.34
CDH13-206ENST00000562601 KBTBD13C9JR72 458 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 GCOM1H8Y6P7 765 aaPredicted RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 DYNC1LI2O43237 492 aaPredicted RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 SORBS3O60504 671 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 POLR2MP0CAP2 368 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 MYCLP12524 364 aaPredicted RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 AKR1A1P14550 325 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 GNAQP50148 359 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 HSD17B4P51659 736 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 BEX3Q00994 111 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 TNFAIP2Q03169 654 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 C8orf34Q49A92 452 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 ARHGEF16Q5VV41 709 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 TAPT1Q6NXT6 567 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 USP17L6PQ6QN14 398 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 SEPT14Q6ZU15 432 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 HEATR3Q7Z4Q2 680 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 C7orf61Q8IZ16 206 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 RETREG2Q8NC44 543 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 RGS22Q8NE09 1264 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 HELQQ8TDG4 1101 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 COPS5Q92905 334 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 TNFRSF25Q93038 417 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 BHMTQ93088 406 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 RMDN3Q96TC7 470 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 NCOA5Q9HCD5 579 aaKnown RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 PDRG1Q9NUG6 133 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 RBM28Q9NW13 759 aaKnown RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 ADD3Q9UEY8 706 aaKnown RBP6.68□□□□□ -1.34
CDH13-206ENST00000562601 CNTNAP5Q8WYK1 1306 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 SYNRGQ9UMZ2 1314 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 DOCK5Q9H7D0 1870 aa6.68□□□□□ -1.34
CDH13-206ENST00000562601 ELOA3CA0A087WX78 387 aaPredicted RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 ELOA3DA6NLF2 546 aaPredicted RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 H0YGN5 161 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 DNM1LO00429 736 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 EPB41L2O43491 1005 aaKnown RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 MSCO60682 206 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 ADAMTS4O75173 837 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 COL6A1P12109 1028 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 PDIA3P30101 505 aaKnown RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 KCNA10Q16322 511 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 UBE2SQ16763 222 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 LY6KQ17RY6 165 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 LRRC26Q2I0M4 334 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 ELOA3BQ3SY89 546 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 WWC2Q6AWC2 1192 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 CAPN12Q6ZSI9 719 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 ETFBKMTQ8IXQ9 262 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 BEND7Q8N7W2 519 aaPredicted RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 ARRDC4Q8NCT1 418 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 DNERQ8NFT8 737 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 ELOA3Q8NG57 546 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 IL31RAQ8NI17 732 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 MORC4Q8TE76 937 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 NSUN6Q8TEA1 469 aaKnown RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 PHKBQ93100 1093 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 WDR11Q9BZH6 1224 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 GSX2Q9BZM3 304 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 TM6SF1Q9BZW5 370 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 VTA1Q9NP79 307 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 PXMP2Q9NR77 195 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 SEPT3Q9UH03 358 aa6.67□□□□□ -1.34
CDH13-206ENST00000562601 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.67□□□□□ -1.34
CDH13-206ENST00000562601 ADARB2-AS1A8MUL3 147 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 SHISA8B8ZZ34 492 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 MEIS2O14770 477 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 ADAMTS3O15072 1205 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 DUSP11O75319 330 aaKnown RBP6.66□□□□□ -1.34
CDH13-206ENST00000562601 ARIH2O95376 493 aa6.66□□□□□ -1.34
CDH13-206ENST00000562601 TXNP10599 105 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms