RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RAG1P15918 1043 aa15.04■□□□□ -0
CDH1-204ENST00000562118 SYN1P17600 705 aa15.04■□□□□ -0
CDH1-204ENST00000562118 MBTPS1Q14703 1052 aa15.04■□□□□ -0
CDH1-204ENST00000562118 HAUS3Q68CZ6 603 aa15.04■□□□□ -0
CDH1-204ENST00000562118 SPRYD3Q8NCJ5 442 aa15.04■□□□□ -0
CDH1-204ENST00000562118 LINC00301Q8NCQ3 95 aa15.04■□□□□ -0
CDH1-204ENST00000562118 TRAPPC12Q8WVT3 735 aa15.04■□□□□ -0
CDH1-204ENST00000562118 RAB34Q9BZG1 259 aa15.04■□□□□ -0
CDH1-204ENST00000562118 DHX33Q9H6R0 707 aaKnown RBP15.04■□□□□ -0
CDH1-204ENST00000562118 PRDM5Q9NQX1 630 aaPredicted RBP15.04■□□□□ -0
CDH1-204ENST00000562118 ANKEF1Q9NU02 776 aa15.04■□□□□ -0
CDH1-204ENST00000562118 PRKAG2Q9UGJ0 569 aa15.04■□□□□ -0
CDH1-204ENST00000562118 SRPRBQ9Y5M8 271 aaKnown RBP15.04■□□□□ -0
CDH1-204ENST00000562118 MICAL3Q7RTP6 2002 aa15.04■□□□□ -0
CDH1-204ENST00000562118 PTPRSQ13332 1948 aa15.04■□□□□ -0
CDH1-204ENST00000562118 MAGEB2O15479 319 aa15.03■□□□□ -0
CDH1-204ENST00000562118 SELPP16109 830 aa15.03■□□□□ -0
CDH1-204ENST00000562118 KLRC1P26715 233 aa15.03■□□□□ -0
CDH1-204ENST00000562118 YWHABP31946 246 aaKnown RBP15.03■□□□□ -0
CDH1-204ENST00000562118 CYP2C18P33260 490 aa15.03■□□□□ -0
CDH1-204ENST00000562118 LONP1P36776 959 aaKnown RBP15.03■□□□□ -0
CDH1-204ENST00000562118 GRIN1Q05586 938 aa15.03■□□□□ -0
CDH1-204ENST00000562118 MKRN4PQ13434 485 aaPredicted RBP15.03■□□□□ -0
CDH1-204ENST00000562118 CTTNQ14247 550 aaKnown RBP15.03■□□□□ -0
CDH1-204ENST00000562118 ECM1Q16610 540 aa15.03■□□□□ -0
CDH1-204ENST00000562118 KIAA0319LQ8IZA0 1049 aa15.03■□□□□ -0
CDH1-204ENST00000562118 BADQ92934 168 aa15.03■□□□□ -0
CDH1-204ENST00000562118 CYP26B1Q9NR63 512 aa15.03■□□□□ -0
CDH1-204ENST00000562118 LRWD1Q9UFC0 647 aa15.03■□□□□ -0
CDH1-204ENST00000562118 DBR1Q9UK59 544 aaKnown RBP15.03■□□□□ -0
CDH1-204ENST00000562118 TMEM150BA6NC51 233 aa15.02■□□□□ -0
CDH1-204ENST00000562118 PPP6R2O75170 966 aa15.02■□□□□ -0
CDH1-204ENST00000562118 MAFO75444 373 aaPredicted RBP15.02■□□□□ -0
CDH1-204ENST00000562118 RARRES1P49788 294 aa15.02■□□□□ -0
CDH1-204ENST00000562118 CHMP4BP1P59074 171 aa15.02■□□□□ -0
CDH1-204ENST00000562118 CYP4A11Q02928 519 aa15.02■□□□□ -0
CDH1-204ENST00000562118 ZNF618Q5T7W0 954 aa15.02■□□□□ -0
CDH1-204ENST00000562118 RASIP1Q5U651 963 aa15.02■□□□□ -0
CDH1-204ENST00000562118 LRRC8DQ7L1W4 858 aa15.02■□□□□ -0
CDH1-204ENST00000562118 C16orf59Q7L2K0 433 aa15.02■□□□□ -0
CDH1-204ENST00000562118 CKAP2LQ8IYA6 745 aa15.02■□□□□ -0
CDH1-204ENST00000562118 ZNF710Q8N1W2 664 aa15.02■□□□□ -0
CDH1-204ENST00000562118 NME8Q8N427 588 aa15.02■□□□□ -0
CDH1-204ENST00000562118 ERMNQ8TAM6 284 aa15.02■□□□□ -0
CDH1-204ENST00000562118 ZBTB10Q96DT7 871 aa15.02■□□□□ -0
CDH1-204ENST00000562118 PCDH10Q9P2E7 1040 aa15.02■□□□□ -0
CDH1-204ENST00000562118 NOD1Q9Y239 953 aa15.02■□□□□ -0
CDH1-204ENST00000562118 SQORQ9Y6N5 450 aa15.02■□□□□ -0
CDH1-204ENST00000562118 A0A1W2PPC1 479 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 VWA3AA6NCI4 1184 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 PP2D1A8MPX8 630 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 ZBTB39O15060 712 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 GAS2O43903 313 aaKnown RBP15.01□□□□□ -0.01
CDH1-204ENST00000562118 PFKMP08237 780 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 CSF2RAP15509 400 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 RFC5P40937 340 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 EPHB4P54760 987 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 FPGSQ05932 587 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 PPIGQ13427 754 aaKnown RBP eCLIP15.01□□□□□ -0.01
CDH1-204ENST00000562118 TMEM119Q4V9L6 283 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 PLA2G4FQ68DD2 849 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 POTEGQ6S5H5 508 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 TMEM199Q8N511 208 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
CDH1-204ENST00000562118 ZNF396Q96N95 335 aaPredicted RBP15.01□□□□□ -0.01
CDH1-204ENST00000562118 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 CCSER1Q9C0I3 900 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 IL23AQ9NPF7 189 aa15.01□□□□□ -0.01
CDH1-204ENST00000562118 SEPT9Q9UHD8 586 aaPredicted RBP15.01□□□□□ -0.01
CDH1-204ENST00000562118 NBNO60934 754 aa15□□□□□ -0.01
CDH1-204ENST00000562118 GPR32O75388 356 aa15□□□□□ -0.01
CDH1-204ENST00000562118 CHRNA1P02708 482 aa15□□□□□ -0.01
CDH1-204ENST00000562118 NPEPPSP55786 919 aa15□□□□□ -0.01
CDH1-204ENST00000562118 IGBP1P78318 339 aa15□□□□□ -0.01
CDH1-204ENST00000562118 FAM43BQ6ZT52 329 aaPredicted RBP15□□□□□ -0.01
CDH1-204ENST00000562118 OTUD6AQ7L8S5 288 aa15□□□□□ -0.01
CDH1-204ENST00000562118 TPH2Q8IWU9 490 aa15□□□□□ -0.01
CDH1-204ENST00000562118 EXOC8Q8IYI6 725 aa15□□□□□ -0.01
CDH1-204ENST00000562118 DNAJB3Q8WWF6 145 aa15□□□□□ -0.01
CDH1-204ENST00000562118 PNMA5Q96PV4 448 aa15□□□□□ -0.01
CDH1-204ENST00000562118 NACC1Q96RE7 527 aa15□□□□□ -0.01
CDH1-204ENST00000562118 XPNPEP1Q9NQW7 623 aa15□□□□□ -0.01
CDH1-204ENST00000562118 RCOR1Q9UKL0 485 aa15□□□□□ -0.01
CDH1-204ENST00000562118 CIZ1Q9ULV3 898 aaPredicted RBP15□□□□□ -0.01
CDH1-204ENST00000562118 DDX11L8A8MPP1 907 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 RSPH10B2B2RC85 870 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 RSPH10BP0C881 870 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 CDC25AP30304 524 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 THPOP40225 353 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 NUCB2P80303 420 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 MRPS6P82932 125 aaKnown RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 MDM2Q00987 491 aaPredicted RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 DNM1Q05193 864 aaKnown RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 TBC1D8BQ0IIM8 1120 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 GRB10Q13322 594 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 MTERF2Q49AM1 385 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 AXDND1Q5T1B0 1012 aaPredicted RBP14.99□□□□□ -0.01
CDH1-204ENST00000562118 KRT79Q5XKE5 535 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 SNX29Q8TEQ0 813 aa14.99□□□□□ -0.01
CDH1-204ENST00000562118 LRRC15Q8TF66 581 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms