RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 HIP1RO75146 1068 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 CYBBP04839 570 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 KCNA6P17658 529 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 POU3F2P20265 443 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-222ENST00000561431 JAM2P57087 298 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 NR1I3Q14994 352 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 NXPE1Q8N323 547 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 NETO2Q8NC67 525 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 SEC14L1Q92503 715 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 INTS4Q96HW7 963 aaKnown RBP5.34□□□□□ -1.55
LRRC28-222ENST00000561431 GPR101Q96P66 508 aaPredicted RBP5.34□□□□□ -1.55
LRRC28-222ENST00000561431 TTC1Q99614 292 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 SP110Q9HB58 689 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 SLC6A20Q9NP91 592 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 FBLN5Q9UBX5 448 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 ATP8A1Q9Y2Q0 1164 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 PCDHB4Q9Y5E5 795 aa5.34□□□□□ -1.55
LRRC28-222ENST00000561431 NEURL4Q96JN8 1562 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 EFCAB6Q5THR3 1501 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 RRBP1Q9P2E9 1410 aaKnown RBP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 H7C1D1 291 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 CBX4O00257 560 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 SLC27A2O14975 620 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 EFEMP2O95967 443 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 DBHP09172 617 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 GLI4P10075 376 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 AMPD3Q01432 767 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 OCRLQ01968 901 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 ZNF174Q15697 407 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 TCERG1LQ5VWI1 586 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 OLFML2BQ68BL8 750 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 NOL8Q76FK4 1167 aaKnown RBP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 OVCH1Q7RTY7 1134 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 KIF18BQ86Y91 864 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 TRIM48Q8IWZ4 208 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 EXOC8Q8IYI6 725 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 NLGN4XQ8N0W4 816 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 Q8N1Y9 231 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 DDX11Q96FC9 970 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 CD244Q9BZW8 370 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 XYLT2Q9H1B5 865 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 CDIP1Q9H305 208 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 PCIF1Q9H4Z3 704 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 RRP7BPQ9NSQ0 103 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 THG1LQ9NWX6 298 aaKnown RBP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 MYOTQ9UBF9 498 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 PALD1Q9ULE6 856 aa5.33□□□□□ -1.56
LRRC28-222ENST00000561431 CNOT6Q9ULM6 557 aaKnown RBP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 SETD1BQ9UPS6 1966 aaKnown RBP5.33□□□□□ -1.56
LRRC28-222ENST00000561431 NLRP1Q9C000 1473 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 PTPRTO14522 1441 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ARHGAP31Q2M1Z3 1444 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ROCK1Q13464 1354 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 TNRQ92752 1358 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 POLR1AO95602 1720 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 WASHC2CQ9Y4E1 1318 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ZNF891A8MT65 544 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SCDO00767 359 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 MAFGO15525 162 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SEMA7AO75326 666 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ZBTB7AO95365 584 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 F2P00734 622 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SLC6A11P48066 632 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 KPNA1P52294 538 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 IRF9Q00978 393 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 DHCR24Q15392 516 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SEPT7Q16181 437 aaKnown RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 TMEM132EQ6IEE7 984 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 STRA8Q7Z7C7 330 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 DDX42Q86XP3 938 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 PASD1Q8IV76 773 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 RBM12BQ8IXT5 1001 aaKnown RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 WDR66Q8TBY9 1149 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ZNF526Q8TF50 670 aaPredicted RBP5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SHISA4Q96DD7 197 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 BOCQ9BWV1 1114 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SMOC1Q9H4F8 434 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 IFT22Q9H7X7 185 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 GCM1Q9NP62 436 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 TNFRSF12AQ9NP84 129 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 RIC8BQ9NVN3 520 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 B4GALT6Q9UBX8 382 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ATP23Q9Y6H3 246 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 SYNMO15061 1565 aa5.32□□□□□ -1.56
LRRC28-222ENST00000561431 ANKRD50Q9ULJ7 1429 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 UBR1Q8IWV7 1749 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 TET3O43151 1660 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 IQGAP3Q86VI3 1631 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 LTBP4Q8N2S1 1624 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 UGGT1Q9NYU2 1555 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 ZNF561-AS1K7EIQ3 104 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 TRAF5O00463 557 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 ABLIM1O14639 778 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 SRGAP3O43295 1099 aa5.31□□□□□ -1.56
LRRC28-222ENST00000561431 BRINP1O60477 761 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms