RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 CHRNA1P02708 482 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 VTNP04004 478 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 TECP42680 631 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 QARSP47897 775 aaKnown RBP11.36□□□□□ -0.59
HERC1-212ENST00000561348 CLCN3P51790 818 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 PSMC5P62195 406 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 ADAM17P78536 824 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 MRPS6P82932 125 aaKnown RBP11.36□□□□□ -0.59
HERC1-212ENST00000561348 TBC1D8BQ0IIM8 1120 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 NFX1Q12986 1120 aaKnown RBP11.36□□□□□ -0.59
HERC1-212ENST00000561348 MBTPS1Q14703 1052 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 ZNF697Q5TEC3 545 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 IER5Q5VY09 327 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 PLA2G4FQ68DD2 849 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 EFCAB12Q6NXP0 572 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 CNKSR3Q6P9H4 555 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 MYOCDQ8IZQ8 938 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 RDM1Q8NG50 284 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 SEPT8Q92599 483 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 TMEM60Q9H2L4 133 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 VAV3Q9UKW4 847 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 PCDHA2Q9Y5H9 948 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 EVPLQ92817 2033 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 TET1Q8NFU7 2136 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 TANC1Q9C0D5 1861 aa11.36□□□□□ -0.59
HERC1-212ENST00000561348 IGSF9BQ9UPX0 1349 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 POTEMA6NI47 508 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 PARNO95453 639 aaKnown RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 P4HBP07237 508 aaKnown RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 OR52Z1P0C646 297 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 MYOGP15173 224 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 TMOD1P28289 359 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 HOXC8P31273 242 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 NPEPPSP55786 919 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 PPP2R5CQ13362 524 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 GPNMBQ14956 572 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 EPHA7Q15375 998 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 ZRSR1Q15695 479 aaKnown RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 KIZQ2M2Z5 673 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 TMEM266Q2M3C6 531 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 TCTN1Q2MV58 587 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 XKR9Q5GH70 373 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 XKR3Q5GH77 459 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 FOXD4L5Q5VV16 416 aaPredicted RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 FOXD4L4Q8WXT5 416 aaPredicted RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 EIF2AK1Q9BQI3 630 aaKnown RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 LXNQ9BS40 222 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
HERC1-212ENST00000561348 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 PCDHB6Q9Y5E3 794 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 TRPV2Q9Y5S1 764 aa11.35□□□□□ -0.59
HERC1-212ENST00000561348 COL1A2P08123 1366 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 SMIM35A0A1B0GVV1 85 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 DKC1O60832 514 aaKnown RBP eCLIP11.34□□□□□ -0.59
HERC1-212ENST00000561348 C22orf31O95567 290 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 DNAJB2P25686 324 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 CD52P31358 61 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 WDR5P61964 334 aaKnown RBP11.34□□□□□ -0.59
HERC1-212ENST00000561348 DEFB103AP81534 67 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 SMAD3P84022 425 aaKnown RBP11.34□□□□□ -0.59
HERC1-212ENST00000561348 RBL2Q08999 1139 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.34□□□□□ -0.598e-9■□□□□ 8.9
HERC1-212ENST00000561348 TIFAQ96CG3 184 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 VWCEQ96DN2 955 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 CEP170P1Q96L14 293 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 PBX4Q9BYU1 374 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 CELF4Q9BZC1 486 aaKnown RBP11.34□□□□□ -0.59
HERC1-212ENST00000561348 CERS4Q9HA82 394 aa11.34□□□□□ -0.59
HERC1-212ENST00000561348 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 ABHD14A-ACY1A0A1B0GW23 586 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 ZBTB42B2RXF5 422 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 ZBTB39O15060 712 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 MAGEB2O15479 319 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 TLL1O43897 1013 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 CAND2O75155 1236 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 AMHP03971 560 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.61e-8■■■■■ 26.9
HERC1-212ENST00000561348 YWHABP31946 246 aaKnown RBP11.33□□□□□ -0.6
HERC1-212ENST00000561348 DNM2P50570 870 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 POLGP54098 1239 aaPredicted RBP11.33□□□□□ -0.6
HERC1-212ENST00000561348 NLRP11P59045 1033 aaKnown RBP11.33□□□□□ -0.6
HERC1-212ENST00000561348 PAK2Q13177 524 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 PTGDRQ13258 359 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 LPIN1Q14693 890 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 RAB30Q15771 203 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 OTUD6AQ7L8S5 288 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 KIAA0319LQ8IZA0 1049 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
HERC1-212ENST00000561348 ERMNQ8TAM6 284 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 PIGOQ8TEQ8 1089 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 NLRP7Q8WX94 980 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 MTMR9Q96QG7 549 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 OSMRQ99650 979 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 ZSWIM4Q9H7M6 989 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 SLC28A3Q9HAS3 691 aa11.33□□□□□ -0.6
HERC1-212ENST00000561348 CDHR5Q9HBB8 845 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms