RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 DENND4AQ7Z401 1863 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 DOCK5Q9H7D0 1870 aa11.06□□□□□ -0.64
HERC1-210ENST00000560897 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 C2orf71A6NGG8 1288 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 LAMTOR5O43504 91 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 NARSO43776 548 aaKnown RBP11.05□□□□□ -0.64
HERC1-210ENST00000560897 PDE4AP27815 886 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 HSD17B4P51659 736 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 IGBP1P78318 339 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 FAM102BQ5T8I3 360 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 TMC5Q6UXY8 1006 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 FAM43BQ6ZT52 329 aaPredicted RBP11.05□□□□□ -0.64
HERC1-210ENST00000560897 ADGRF4Q8IZF3 695 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 ABI1Q8IZP0 508 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 MRPL43Q8N983 215 aaKnown RBP11.05□□□□□ -0.64
HERC1-210ENST00000560897 NETO1Q8TDF5 533 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 LRRCC1Q9C099 1032 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 PCDHGA2Q9Y5H1 932 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
HERC1-210ENST00000560897 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
HERC1-210ENST00000560897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.04□□□□□ -0.64
HERC1-210ENST00000560897 HOXA2O43364 376 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 STAM2O75886 525 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 RLBP1P12271 317 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 MARK3P27448 753 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 TMEM62Q0P6H9 643 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 ZNF528Q3MIS6 628 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 PHLDB3Q6NSJ2 640 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 KCNT2Q6UVM3 1135 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 STOX1Q6ZVD7 989 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 LRRC43Q8N309 656 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 GLG1Q92896 1179 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 TNPO1Q92973 898 aaKnown RBP11.04□□□□□ -0.64
HERC1-210ENST00000560897 ZFP91Q96JP5 570 aaPredicted RBP11.04□□□□□ -0.64
HERC1-210ENST00000560897 SEC62Q99442 399 aaKnown RBP11.04□□□□□ -0.64
HERC1-210ENST00000560897 AMNQ9BXJ7 453 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 CWH43Q9H720 699 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 SFXN1Q9H9B4 322 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 VAT1LQ9HCJ6 419 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 ARHGEF3Q9NR81 526 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 SPATA6Q9NWH7 488 aaPredicted RBP11.04□□□□□ -0.64
HERC1-210ENST00000560897 ERAP1Q9NZ08 941 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 SPG21Q9NZD8 308 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
HERC1-210ENST00000560897 MIA3Q5JRA6 1907 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 MBLAC1A4D2B0 266 aaPredicted RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 RRN3P2A6NIE6 340 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 FIBPO43427 364 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 SRFP11831 508 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 HOXB3P14651 431 aaPredicted RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 HOXA13P31271 388 aaPredicted RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 GBP2P32456 591 aaPredicted RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 TMEM266Q2M3C6 531 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 SLC24A5Q71RS6 500 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 FCHSD1Q86WN1 690 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 SAMD3Q8N6K7 520 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 DDX1Q92499 740 aaKnown RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 ADAM2Q99965 735 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 BCO2Q9BYV7 579 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 CELF4Q9BZC1 486 aaKnown RBP11.03□□□□□ -0.64
HERC1-210ENST00000560897 TMEM117Q9H0C3 514 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 FBXO4Q9UKT5 387 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 RAB23Q9ULC3 237 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 GINS2Q9Y248 185 aa11.03□□□□□ -0.64
HERC1-210ENST00000560897 GCOM1H8Y6P7 765 aaPredicted RBP11.02□□□□□ -0.65
HERC1-210ENST00000560897 SLC30A4O14863 429 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 RPS6KA5O75582 802 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 CXCL14O95715 111 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 POLR2MP0CAP2 368 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 FGFR1P11362 822 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.65
HERC1-210ENST00000560897 KRT76Q01546 638 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
HERC1-210ENST00000560897 GIT2Q14161 759 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 LETM2Q2VYF4 491 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 ASPRV1Q53RT3 343 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 KANK3Q6NY19 840 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 GPR149Q86SP6 731 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 PPFIBP1Q86W92 1011 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 GIMAP8Q8ND71 665 aaPredicted RBP11.02□□□□□ -0.65
HERC1-210ENST00000560897 PJA1Q8NG27 643 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 STAMQ92783 540 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 TMEM169Q96HH4 297 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 SHDQ96IW2 340 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 TMX1Q9H3N1 280 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 BCAS3Q9H6U6 928 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 KAT14Q9H8E8 782 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 RGS18Q9NS28 235 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 TMEM161AQ9NX61 479 aa11.02□□□□□ -0.65
HERC1-210ENST00000560897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.01□□□□□ -0.65
HERC1-210ENST00000560897 POTEMA6NI47 508 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 SOBPA7XYQ1 873 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 TBC1D4O60343 1298 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 FGRP09769 529 aa11.01□□□□□ -0.65
HERC1-210ENST00000560897 PARP1P09874 1014 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms