RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 CDY2AQ9Y6F7 541 aa17.16■□□□□ 0.34
SNRPA1-213ENST00000560856 BAIAP3O94812 1187 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 SLITRK3O94933 977 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 ACTN1P12814 892 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 LPIN1Q14693 890 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 MCTP1Q6DN14 999 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 RSPH3Q86UC2 560 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 NME8Q8N427 588 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 DYDC2Q96IM9 177 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 MTIF3Q9H2K0 278 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 CEP131Q9UPN4 1083 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 SLC4A7Q9Y6M7 1214 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 KDM3AQ9Y4C1 1321 aa17.15■□□□□ 0.34
SNRPA1-213ENST00000560856 SIP14410 1827 aa17.14■□□□□ 0.34
SNRPA1-213ENST00000560856 IGKV6-21A0A0C4DH24 114 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 H3BQV1 296 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 MAGEB2O15479 319 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 OR52Z1P0C646 297 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 WDR5P61964 334 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 FBXO47Q5MNV8 452 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 C4orf19Q8IY42 314 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 SH2D3AQ9BRG2 576 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 LXNQ9BS40 222 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 CDHR5Q9HBB8 845 aa17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-213ENST00000560856 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 POTEMA6NI47 508 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 DDX11L8A8MPP1 907 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 ZBBXA8MT70 800 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 ZBTB39O15060 712 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 GHRP10912 638 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 PBX2P40425 430 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 CLCN3P51790 818 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 TMEM62Q0P6H9 643 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 IER5Q5VY09 327 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 ZNF579Q8NAF0 562 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 PBX4Q9BYU1 374 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 CELF4Q9BZC1 486 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 SEPT9Q9UHD8 586 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 TRPV2Q9Y5S1 764 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 SQORQ9Y6N5 450 aa17.13■□□□□ 0.33
SNRPA1-213ENST00000560856 DKC1O60832 514 aaKnown RBP eCLIP17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 GPR32O75388 356 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 LYPLA2O95372 231 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 SPATA31C1P0DKV0 1188 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 ATP2A2P16615 1042 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 SYT1P21579 422 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 NPEPPSP55786 919 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 DEFB103AP81534 67 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 PTGDRQ13258 359 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 IKBKEQ14164 716 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 MTERF2Q49AM1 385 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 PLA2G4FQ68DD2 849 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 EFCAB12Q6NXP0 572 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 Q7L0L9 218 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 LRRC71Q8N4P6 559 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 PHOSPHO2Q8TCD6 241 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 SEPT8Q92599 483 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 ZSWIM4Q9H7M6 989 aa17.12■□□□□ 0.33
SNRPA1-213ENST00000560856 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 MAFO75444 373 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 DNAJB2P25686 324 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 TECP42680 631 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 RABGGTBP53611 331 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 TBC1D8BQ0IIM8 1120 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 DRP2Q13474 957 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 IL17AQ16552 155 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 RILPL1Q5EBL4 403 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 TPH2Q8IWU9 490 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 METTL13Q8N6R0 699 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 NEK9Q8TD19 979 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 TMEM40Q8WWA1 233 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 SLC9A7Q96T83 725 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 IFIH1Q9BYX4 1025 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 TTYH1Q9H313 450 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 CYP26B1Q9NR63 512 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 YBX2Q9Y2T7 364 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 PTPRSQ13332 1948 aa17.11■□□□□ 0.33
SNRPA1-213ENST00000560856 MICAL3Q7RTP6 2002 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 EFCAB14O75071 495 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 VTNP04004 478 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 PDCP20941 246 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 YWHABP31946 246 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 FXR2P51116 673 aaKnown RBP eCLIP17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 TSHZ1Q6ZSZ6 1077 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 HERC6Q8IVU3 1022 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 APBB2Q92870 758 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 DHX33Q9H6R0 707 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-213ENST00000560856 MED24O75448 989 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 SLC34A2O95436 690 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms