RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ZNF806P0C7X5 589 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 CEACAM1P13688 526 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 APOBRQ0VD83 1088 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 PTPRNQ16849 979 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 SWI5Q1ZZU3 235 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 RNF43Q68DV7 783 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 KANK3Q6NY19 840 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 SERINC5Q86VE9 423 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 DHX37Q8IY37 1157 aaKnown RBP7.72□□□□□ -1.17
HERC1-208ENST00000560462 LRRC47Q8N1G4 583 aaKnown RBP7.72□□□□□ -1.17
HERC1-208ENST00000560462 FAM200AQ8TCP9 573 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 COPS5Q92905 334 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 GPKOWQ92917 476 aaPredicted RBP eCLIP7.72□□□□□ -1.17
HERC1-208ENST00000560462 TCF25Q9BQ70 676 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 ALG1Q9BT22 464 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 OSBPL6Q9BZF3 934 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 SLC38A10Q9HBR0 1119 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 MTF2Q9Y483 593 aaPredicted RBP7.72□□□□□ -1.17
HERC1-208ENST00000560462 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.72□□□□□ -1.17
HERC1-208ENST00000560462 PLXNA4Q9HCM2 1894 aa7.72□□□□□ -1.17
HERC1-208ENST00000560462 C2CD3Q4AC94 2353 aa7.71□□□□□ -1.17
HERC1-208ENST00000560462 ASXL3Q9C0F0 2248 aa7.71□□□□□ -1.17
HERC1-208ENST00000560462 NOTCH2Q04721 2471 aa7.71□□□□□ -1.17
HERC1-208ENST00000560462 CAPN8A6NHC0 703 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 CTSHP09668 335 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 OAZ1P54368 228 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 GABPAQ06546 454 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 PPP2R5DQ14738 602 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 TWISTNBQ3B726 338 aaPredicted RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 CRTC2Q53ET0 693 aaPredicted RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 THNSL1Q8IYQ7 743 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 LSM14AQ8ND56 463 aaKnown RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 C1orf216Q8TAB5 229 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 FAM174AQ8TBP5 190 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 NXPE3Q969Y0 559 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 NUP88Q99567 741 aaPredicted RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 KATNAL1Q9BW62 490 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 SRCIN1Q9C0H9 1055 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 NGRNQ9NPE2 291 aaKnown RBP7.71□□□□□ -1.18
HERC1-208ENST00000560462 SLC2A4RGQ9NR83 387 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 DZANK1Q9NVP4 752 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 VPS9D1Q9Y2B5 631 aa7.71□□□□□ -1.18
HERC1-208ENST00000560462 ENPP3O14638 875 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 CAND2O75155 1236 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 TXNP10599 105 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 TDGF1P13385 188 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 EEF2P13639 858 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 CASTP20810 708 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 RASA1P20936 1047 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 RFX5P48382 616 aaPredicted RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 TIMM10P62072 90 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 DYNLL1P63167 89 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 SCAPQ12770 1279 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 KIAA0753Q2KHM9 967 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 MAP7D1Q3KQU3 841 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 SLFNL1Q499Z3 407 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 SPOUT1Q5T280 376 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 PDXDC2PQ6P474 469 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 TMC5Q6UXY8 1006 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 RASGRP2Q7LDG7 609 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 FAM160A2Q8N612 972 aaPredicted RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 ARMC2Q8NEN0 867 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 SCFD2Q8WU76 684 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 KIFC2Q96AC6 838 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 DDX23Q9BUQ8 820 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 CCDC86Q9H6F5 360 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 RNF146Q9NTX7 359 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 PUF60Q9UHX1 559 aaKnown RBP7.7□□□□□ -1.18
HERC1-208ENST00000560462 LZTS1Q9Y250 596 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 RAXQ9Y2V3 346 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 KIAA1671Q9BY89 1806 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 IL16Q14005 1332 aa7.7□□□□□ -1.18
HERC1-208ENST00000560462 RALGAPA1Q6GYQ0 2036 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 FAM221BA6H8Z2 402 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 PYCARD-AS1I3L0S3 204 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 RNF40O75150 1001 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 CIAO1O76071 339 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 WISP1O95388 367 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 POLR3DP05423 398 aaPredicted RBP7.69□□□□□ -1.18
HERC1-208ENST00000560462 GBP2P32456 591 aaPredicted RBP7.69□□□□□ -1.18
HERC1-208ENST00000560462 RPS9P46781 194 aaKnown RBP7.69□□□□□ -1.18
HERC1-208ENST00000560462 PTK2Q05397 1052 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 MTAPQ13126 283 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 SNW1Q13573 536 aaKnown RBP7.69□□□□□ -1.18
HERC1-208ENST00000560462 NCOA4Q13772 614 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 ZBTB41Q5SVQ8 909 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 DAB2IPQ5VWQ8 1189 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 BRICD5Q6PL45 260 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 ANKMY2Q8IV38 441 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 PHTF2Q8N3S3 785 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 CLDN23Q96B33 292 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 XAGE2Q96GT9 111 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 ARRDC1-AS1Q9H2J1 176 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 CYP39A1Q9NYL5 469 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 ADD3Q9UEY8 706 aaKnown RBP7.69□□□□□ -1.18
HERC1-208ENST00000560462 MYH1P12882 1939 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 MIA3Q5JRA6 1907 aa7.69□□□□□ -1.18
HERC1-208ENST00000560462 DENND4AQ7Z401 1863 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms