RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 RSPH3Q86UC2 560 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 GDPD5Q8WTR4 605 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 TOP1MTQ969P6 601 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 SAMD11Q96NU1 681 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 SUGCTQ9HAC7 445 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 TRPC6Q9Y210 931 aa17.15■□□□□ 0.34
SNRPA1-210ENST00000560383 WDR64B1ANS9 1081 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 GAS7O60861 476 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 MMP1P03956 469 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 PSAPP07602 524 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 SFNP31947 248 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 KRT2P35908 639 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 MGAT3Q09327 533 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 EARS2Q5JPH6 523 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 PDXDC2PQ6P474 469 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 PIK3AP1Q6ZUJ8 805 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 CCDC83Q8IWF9 413 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 RDM1Q8NG50 284 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 UHRF1Q96T88 793 aaPredicted RBP17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 UPF2Q9HAU5 1272 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 KCNMB3Q9NPA1 279 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 DISC1Q9NRI5 854 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 DDX25Q9UHL0 483 aaKnown RBP17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 PCDHA2Q9Y5H9 948 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 IGSF9BQ9UPX0 1349 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 COL1A2P08123 1366 aa17.14■□□□□ 0.33
SNRPA1-210ENST00000560383 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 CHRNA1P02708 482 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 BMP1P13497 986 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 TFF2Q03403 129 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 NR5A1Q13285 461 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 LETM2Q2VYF4 491 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 FAM117BQ6P1L5 589 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 BBXQ8WY36 941 aaPredicted RBP17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 YME1L1Q96TA2 773 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 TEKT3Q9BXF9 490 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
SNRPA1-210ENST00000560383 ZBTB42B2RXF5 422 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 TBX3O15119 743 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 SLC37A4O43826 429 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 JAK3P52333 1124 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 IGBP1P78318 339 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 HMGN5P82970 282 aaKnown RBP17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 ZNF484Q5JVG2 852 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 TRAPPC12Q8WVT3 735 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 DNAJB3Q8WWF6 145 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 HLA-CQ95604 372 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 GJA10Q969M2 543 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 FAM20AQ96MK3 541 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 GABBR1Q9UBS5 961 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 MTUS1Q9ULD2 1270 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 SQORQ9Y6N5 450 aa17.12■□□□□ 0.33
SNRPA1-210ENST00000560383 SMIM35A0A1B0GVV1 85 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 BTBD18B2RXH4 712 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 GHRP10912 638 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 CACNB1Q02641 598 aaPredicted RBP17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 TRIM29Q14134 588 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 LPIN1Q14693 890 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 MTHFD1LQ6UB35 978 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 TSHZ1Q6ZSZ6 1077 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 DIS3L2Q8IYB7 885 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 ZBTB10Q96DT7 871 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 C17orf80Q9BSJ5 609 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 SAMM50Q9Y512 469 aa17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
SNRPA1-210ENST00000560383 BRWD1Q9NSI6 2320 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 TTC3P53804 2025 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 ST18O60284 1047 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 ZNF862O60290 1169 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 CCNT1O60563 726 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 KLRC1P26715 233 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 MRPS6P82932 125 aaKnown RBP17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 PPP2R5CQ13362 524 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 EPC2Q52LR7 807 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 FBXO47Q5MNV8 452 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 FAM43BQ6ZT52 329 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 NME8Q8N427 588 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 HAS1Q92839 578 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 FAM167AQ96KS9 214 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 CDY2AQ9Y6F7 541 aa17.1■□□□□ 0.33
SNRPA1-210ENST00000560383 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 CHMP2AO43633 222 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 C22orf31O95567 290 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 KCNQ1P51787 676 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 IER5Q5VY09 327 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 MIER3Q7Z3K6 550 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 CKAP2LQ8IYA6 745 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 KIAA0319LQ8IZA0 1049 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 FBXO18Q8NFZ0 1043 aa17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 MRPL38Q96DV4 380 aaKnown RBP17.09■□□□□ 0.33
SNRPA1-210ENST00000560383 CEP131Q9UPN4 1083 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms