RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 AZI2Q9H6S1 392 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 KCNH7Q9NS40 1196 aa22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 NOC2LQ9Y3T9 749 aaKnown RBP22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 PTPRZ1P23471 2315 aaPredicted RBP22.64■■□□□ 1.21
RABGGTA-214ENST00000560163 ATG7O95352 703 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 TECP42680 631 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 STAT5BP51692 787 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 ACTR2P61160 394 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 FAM189BP81408 668 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 PLCB3Q01970 1234 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 UBE2SQ16763 222 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 SPOUT1Q5T280 376 aaKnown RBP22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 ASCL5Q7RTU5 278 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 RALYLQ86SE5 291 aaKnown RBP22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 MB21D2Q8IYB1 491 aaPredicted RBP22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 ZNF654Q8IZM8 581 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 LZTS2Q9BRK4 669 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 LY9Q9HBG7 655 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 C1orf112Q9NSG2 853 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 SEC63Q9UGP8 760 aaKnown RBP22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 PCDHA6Q9UN73 950 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 PCDHA8Q9Y5H6 950 aa22.63■■□□□ 1.21
RABGGTA-214ENST00000560163 DDAH1O94760 285 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 PLEKHA8P1O95397 391 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 KIF5BP33176 963 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 AAMPQ13685 434 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 THNSL1Q8IYQ7 743 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 KIAA0319LQ8IZA0 1049 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 CTCFLQ8NI51 663 aaPredicted RBP22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 CYP2W1Q8TAV3 490 aa22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 MRPS27Q92552 414 aaKnown RBP22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 RNF216Q9NWF9 866 aaPredicted RBP22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 RIF1Q5UIP0 2472 aaKnown RBP22.62■■□□□ 1.21
RABGGTA-214ENST00000560163 NFASCO94856 1347 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 IGKV6D-21A0A0A0MT36 114 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 HIDE1A8MVS5 230 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 RPS6KA5O75582 802 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 HOXB8P17481 243 aaPredicted RBP22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 KLRC1P26715 233 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 NBL1P41271 181 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 APOBRQ0VD83 1088 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 KREMEN2Q8NCW0 462 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 MXRA8Q9BRK3 442 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 ST3GAL5Q9UNP4 418 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 MYO10Q9HD67 2058 aa22.61■■□□□ 1.21
RABGGTA-214ENST00000560163 SRGAP2BP0DMP2 458 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 IBSPP21815 317 aaPredicted RBP22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 PLPP4Q5VZY2 271 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 LRRC55Q6ZSA7 311 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 CMTR1Q8N1G2 835 aaKnown RBP22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 APOL5Q9BWW9 433 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 ELAC1Q9H777 363 aaKnown RBP22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 TMEM161AQ9NX61 479 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 CDH22Q9UJ99 828 aa22.6■■□□□ 1.21
RABGGTA-214ENST00000560163 DENND3A2RUS2 1198 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 SPDYE3A6NKU9 549 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 BRD1O95696 1058 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 FGFR1P11362 822 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 LAG3P18627 525 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 SP100P23497 879 aaPredicted RBP22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 SLC26A2P50443 739 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 ITGB3BPQ13352 177 aaPredicted RBP22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 UBALD2Q8IYN6 164 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 TMEM105Q8N8V8 129 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 TCF25Q9BQ70 676 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 NGRNQ9NPE2 291 aaKnown RBP22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 SORCS3Q9UPU3 1222 aa22.59■■□□□ 1.21
RABGGTA-214ENST00000560163 PRR23AA6NEV1 266 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 GPR182O15218 404 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 ARP10275 920 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 PDE4AP27815 886 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 GNAQP50148 359 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 DSC3Q14574 896 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 LLGL2Q6P1M3 1020 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 ZBTB33Q86T24 672 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 ATP6V0A4Q9HBG4 840 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 RNF19AQ9NV58 838 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 PUF60Q9UHX1 559 aaKnown RBP22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 GINS2Q9Y248 185 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 NR2E1Q9Y466 385 aa22.58■■□□□ 1.21
RABGGTA-214ENST00000560163 ZBTB42B2RXF5 422 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 HBP1O60381 514 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 GSPT1P15170 499 aaKnown RBP22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 MTMR3Q13615 1198 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 ODR4Q5SWX8 454 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 CASD1Q96PB1 797 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 MTA3Q9BTC8 594 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 POMKQ9H5K3 350 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 AGO4Q9HCK5 861 aaKnown RBP22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 EVPLQ92817 2033 aa22.57■■□□□ 1.2
RABGGTA-214ENST00000560163 FAM186AA6NE01 2351 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 hCG_1642624A0A1W2PR95 340 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 C2CD4DB7Z1M9 353 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 CCNE2O96020 404 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 CRYBB1P53674 252 aaPredicted RBP22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 KCNT2Q6UVM3 1135 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 ABHD15Q6UXT9 468 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 FAM228AQ86W67 206 aa22.56■■□□□ 1.2
RABGGTA-214ENST00000560163 TMEM117Q9H0C3 514 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms