RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 C1orf112Q9NSG2 853 aa12.37□□□□□ -0.43
TRAF3-207ENST00000559734 PCDHA2Q9Y5H9 948 aa12.37□□□□□ -0.43
TRAF3-207ENST00000559734 CACNA1HO95180 2353 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 MEIS2O14770 477 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 HOXB8P17481 243 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 ITGB5P18084 799 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 PDE4AP27815 886 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 PBX3P40426 434 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 KCNC3Q14003 757 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 WTAPQ15007 396 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 TDRD5Q8NAT2 981 aaKnown RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 RRP36Q96EU6 259 aaKnown RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 NECTIN4Q96NY8 510 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 PCYT2Q99447 389 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 ATP6V0A4Q9HBG4 840 aa12.36□□□□□ -0.43
TRAF3-207ENST00000559734 JPH1Q9HDC5 661 aaPredicted RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 SEC63Q9UGP8 760 aaKnown RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 NOC2LQ9Y3T9 749 aaKnown RBP12.36□□□□□ -0.43
TRAF3-207ENST00000559734 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 UBE2SQ16763 222 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 RARS2Q5T160 578 aaKnown RBP12.35□□□□□ -0.43
TRAF3-207ENST00000559734 MTHFD1LQ6UB35 978 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 SLC24A5Q71RS6 500 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 CATIPQ7Z7H3 387 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 RASGRP4Q8TDF6 673 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 KCNG4Q8TDN1 519 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 ADAM7Q9H2U9 754 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 CWH43Q9H720 699 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 NGRNQ9NPE2 291 aaKnown RBP12.35□□□□□ -0.43
TRAF3-207ENST00000559734 SLC9A2Q9UBY0 812 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 LIMD1Q9UGP4 676 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 DBR1Q9UK59 544 aaKnown RBP12.35□□□□□ -0.43
TRAF3-207ENST00000559734 ST3GAL5Q9UNP4 418 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 HCFC2Q9Y5Z7 792 aa12.35□□□□□ -0.43
TRAF3-207ENST00000559734 PTPRZ1P23471 2315 aaPredicted RBP12.35□□□□□ -0.43
TRAF3-207ENST00000559734 SPDYE3A6NKU9 549 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 HIP1O00291 1037 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 PIK3CDO00329 1044 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 STAT5BP51692 787 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 KRT17Q04695 432 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 ODR4Q5SWX8 454 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 CWF19L1Q69YN2 538 aaKnown RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 KCNT2Q6UVM3 1135 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 RALYLQ86SE5 291 aaKnown RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 ABI1Q8IZP0 508 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 NME8Q8N427 588 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 C12orf76Q8N812 135 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 TMEM87AQ8NBN3 555 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 TMEM40Q8WWA1 233 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 ZNF558Q96NG5 402 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 CDHR5Q9HBB8 845 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 JADE2Q9NQC1 790 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 RGS18Q9NS28 235 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 UBIAD1Q9Y5Z9 338 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 BAZ2BQ9UIF8 2168 aaKnown RBP12.34□□□□□ -0.43
TRAF3-207ENST00000559734 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
TRAF3-207ENST00000559734 MED19A0JLT2 244 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-207ENST00000559734 C9IYK1 514 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 BACH1O14867 736 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 GPR182O15218 404 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 KLRC1P26715 233 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 PPM1AP35813 382 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 MTHFRP42898 656 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 CLCN5P51795 746 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 ACTR2P61160 394 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 ITIH3Q06033 890 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 TROAPQ12815 778 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 KANK3Q6NY19 840 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 LRRC43Q8N309 656 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 CTCFLQ8NI51 663 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-207ENST00000559734 OSMRQ99650 979 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 SDF4Q9BRK5 362 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 TMEM117Q9H0C3 514 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 PSTPIP2Q9H939 334 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 TMEM161AQ9NX61 479 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 FBXL21Q9UKT6 434 aa12.33□□□□□ -0.44
TRAF3-207ENST00000559734 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-207ENST00000559734 SPDYE4A6NLX3 237 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
TRAF3-207ENST00000559734 CLASP2O75122 1294 aaKnown RBP12.32□□□□□ -0.44
TRAF3-207ENST00000559734 ANGPT1Q15389 498 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 KIZQ2M2Z5 673 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 LRRC55Q6ZSA7 311 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 DGLUCYQ7Z3D6 616 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 HINFPQ9BQA5 517 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 SPG21Q9NZD8 308 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 LOXHD1Q8IVV2 1947 aa12.32□□□□□ -0.44
TRAF3-207ENST00000559734 C2orf71A6NGG8 1288 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms