RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 NXPE1Q8N323 547 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 IGDCC4Q8TDY8 1250 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 ADAMTS17Q8TE56 1095 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 ORAI3Q9BRQ5 295 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 TACO1Q9BSH4 297 aaKnown RBP4.81□□□□□ -1.64
CASC4-210ENST00000559550 AMNQ9BXJ7 453 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 CABP5Q9NP86 173 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 KCND1Q9NSA2 647 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 H2AFY2Q9P0M6 372 aaPredicted RBP4.81□□□□□ -1.64
CASC4-210ENST00000559550 ARHGAP20Q9P2F6 1191 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 ARHGAP28Q9P2N2 729 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 ST6GALNAC2Q9UJ37 374 aa4.81□□□□□ -1.64
CASC4-210ENST00000559550 FOXP2O15409 715 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 PDE8AO60658 829 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 KNG1P01042 644 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 ATP2A2P16615 1042 aaKnown RBP4.8□□□□□ -1.64
CASC4-210ENST00000559550 PTGS1P23219 599 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 SDHAP31040 664 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 KIF11P52732 1056 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 HERVK_113P62684 666 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 ARHGAP44Q17R89 818 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 MCTP2Q6DN12 878 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 LRSAM1Q6UWE0 723 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 TXNDC5Q8NBS9 432 aaKnown RBP4.8□□□□□ -1.64
CASC4-210ENST00000559550 UCKL1Q9NWZ5 548 aa4.8□□□□□ -1.64
CASC4-210ENST00000559550 ING1Q9UK53 422 aaPredicted RBP4.8□□□□□ -1.64
CASC4-210ENST00000559550 PRAMEF22A3QJZ6 481 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 HIP1RO75146 1068 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 F2P00734 622 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 SLC9A1P19634 815 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 PTX3P26022 381 aaPredicted RBP4.79□□□□□ -1.64
CASC4-210ENST00000559550 DSG1Q02413 1049 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 HNRNPA0Q13151 305 aaKnown RBP4.79□□□□□ -1.64
CASC4-210ENST00000559550 RGL3Q3MIN7 710 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 EGFLAMQ63HQ2 1017 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 TRMT10BQ6PF06 316 aaKnown RBP4.79□□□□□ -1.64
CASC4-210ENST00000559550 KIF18BQ86Y91 864 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 PPM1KQ8N3J5 372 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 KIAA1958Q8N8K9 716 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 CHST13Q8NET6 341 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 NUDT10Q8NFP7 164 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 FOXRED1Q96CU9 486 aaPredicted RBP4.79□□□□□ -1.64
CASC4-210ENST00000559550 NUDT11Q96G61 164 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 YTHDC1Q96MU7 727 aaKnown RBP4.79□□□□□ -1.64
CASC4-210ENST00000559550 GBP4Q96PP9 640 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 WRNIP1Q96S55 665 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 VPS11Q9H270 941 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 INCENPQ9NQS7 918 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 OXSMQ9NWU1 459 aa4.79□□□□□ -1.64
CASC4-210ENST00000559550 H7C1D1 291 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 KLHL18O94889 574 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 FBXO21O94952 628 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 SMAD2Q15796 467 aaKnown RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 CC2D1AQ6P1N0 951 aaPredicted RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 USP51Q70EK9 711 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 RNF180Q86T96 592 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 RTN4RL1Q86UN2 441 aaPredicted RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 UBR7Q8N806 425 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 CHTF18Q8WVB6 975 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 LEO1Q8WVC0 666 aaPredicted RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 ERCC4Q92889 916 aaPredicted RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 MBD6Q96DN6 1003 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 ELF4Q99607 663 aaPredicted RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 L2HGDHQ9H9P8 463 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 THG1LQ9NWX6 298 aaKnown RBP4.78□□□□□ -1.64
CASC4-210ENST00000559550 GALNT8Q9NY28 637 aa4.78□□□□□ -1.64
CASC4-210ENST00000559550 GOLGA6L22H0YM25 854 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 CYP7B1O75881 506 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 MASP1P48740 699 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 IL13RA1P78552 427 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 FAM26FQ5R3K3 315 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 ESRP1Q6NXG1 681 aaKnown RBP4.77□□□□□ -1.65
CASC4-210ENST00000559550 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 HIPK4Q8NE63 616 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 ACSS2Q9NR19 701 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 ZKSCAN5Q9Y2L8 839 aa4.77□□□□□ -1.65
CASC4-210ENST00000559550 TGM5O43548 720 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 GAS7O60861 476 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 AMHP03971 560 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 CYP1A1P04798 512 aaPredicted RBP4.76□□□□□ -1.65
CASC4-210ENST00000559550 CHGBP05060 677 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 ADCYAP1R1P41586 468 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 ECE1P42892 770 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 FNTBP49356 437 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 STILQ15468 1287 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 LIMS2Q7Z4I7 341 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 STRA8Q7Z7C7 330 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 ZNF575Q86XF7 245 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 AHI1Q8N157 1196 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 C16orf92Q96LL3 132 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 GPR101Q96P66 508 aaPredicted RBP4.76□□□□□ -1.65
CASC4-210ENST00000559550 TMEM168Q9H0V1 697 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 SLKQ9H2G2 1235 aaPredicted RBP4.76□□□□□ -1.65
CASC4-210ENST00000559550 PCIF1Q9H4Z3 704 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.76□□□□□ -1.65
CASC4-210ENST00000559550 CD248Q9HCU0 757 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 IFT57Q9NWB7 429 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 FTSJ1Q9UET6 329 aa4.76□□□□□ -1.65
CASC4-210ENST00000559550 MAPRE3Q9UPY8 281 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms