RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 ARHGAP1Q07960 439 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 CALCRLQ16602 461 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 LY6KQ17RY6 165 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 FILIP1LQ4L180 1135 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 PRR16Q569H4 304 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 C1orf53Q5VUE5 145 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 HAUS3Q68CZ6 603 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 METTL7BQ6UX53 244 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 NECAB2Q7Z6G3 386 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 GRAMD1CQ8IYS0 662 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 SLC43A3Q8NBI5 491 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 ARRDC4Q8NCT1 418 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 ANKRD20A12PQ8NF67 263 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 CYP2W1Q8TAV3 490 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 SPATA20Q8TB22 786 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 CCDC47Q96A33 483 aaKnown RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 TEKT3Q9BXF9 490 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 SEZ6LQ9BYH1 1024 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 AGO4Q9HCK5 861 aaKnown RBP8.54□□□□□ -1.04
LRRC28-211ENST00000558890 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 TELO2Q9Y4R8 837 aa8.54□□□□□ -1.04
LRRC28-211ENST00000558890 TRIOBPQ9H2D6 2365 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 GOLGA6L9A6NEM1 432 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 MSH4O15457 936 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 DHX15O43143 795 aaKnown RBP8.53□□□□□ -1.04
LRRC28-211ENST00000558890 SLC37A4O43826 429 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 KPNA6O60684 536 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 ATP9AO75110 1047 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 ATG7O95352 703 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 GH1P01241 217 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 MYCLP12524 364 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-211ENST00000558890 STAT6P42226 847 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 BEX3Q00994 111 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 MLLT1Q03111 559 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-211ENST00000558890 SPAG1Q07617 926 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 SPIRE1Q08AE8 756 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 DPYDQ12882 1025 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 LAMC2Q13753 1193 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 LRRC26Q2I0M4 334 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 BRDTQ58F21 947 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-211ENST00000558890 HYIQ5T013 277 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 SPATA1Q5VX52 437 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 ARMCX5Q6P1M9 558 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 SLC39A5Q6ZMH5 540 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 NYAP1Q6ZVC0 841 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 USP49Q70CQ1 688 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 PPTC7Q8NI37 304 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 KIF18AQ8NI77 898 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 HAS1Q92839 578 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 EPSTI1Q96J88 318 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 CTAGE1Q96RT6 745 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 ZNF577Q9BSK1 485 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 HSD3B7Q9H2F3 369 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 TRMT1Q9NXH9 659 aaKnown RBP8.53□□□□□ -1.04
LRRC28-211ENST00000558890 PCDHA12Q9UN75 941 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 PPME1Q9Y570 386 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 EMSYQ7Z589 1322 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 KDM3AQ9Y4C1 1321 aa8.53□□□□□ -1.04
LRRC28-211ENST00000558890 MYH9P35579 1960 aaKnown RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 IGKV6D-21A0A0A0MT36 114 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 WDR64B1ANS9 1081 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 ZSCAN12O43309 604 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 GAS7O60861 476 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 LYPLA2O95372 231 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 MYL1P05976 194 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 ASGR1P07306 291 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 TPM1P09493 284 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 TXNP10599 105 aaKnown RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 ZNF18P17022 549 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 BMP6P22004 513 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 UBA1P22314 1058 aaKnown RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 CPT1AP50416 773 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 ACLYP53396 1101 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 SYCP1Q15431 976 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 GLIPR1L2Q4G1C9 344 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 CELF3Q5SZQ8 465 aaKnown RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 LRCH2Q5VUJ6 765 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 SPECC1LQ69YQ0 1117 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 KLHL10Q6JEL2 608 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 TLK2Q86UE8 772 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 ERMNQ8TAM6 284 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 AFAP1L1Q8TED9 768 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 KAT2BQ92831 832 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 PPP1R13BQ96KQ4 1090 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 GTPBP4Q9BZE4 634 aaKnown RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 CCSER1Q9C0I3 900 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 SENP6Q9GZR1 1112 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 NT5C3AQ9H0P0 336 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 C11orf49Q9H6J7 331 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 MAGEF1Q9HAY2 307 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 JPH1Q9HDC5 661 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-211ENST00000558890 TUFT1Q9NNX1 390 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 SLC9A2Q9UBY0 812 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 VAV3Q9UKW4 847 aa8.52□□□□□ -1.05
LRRC28-211ENST00000558890 LAMA2P24043 3122 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms