RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 IMPG2Q9BZV3 1241 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 SNX24Q9Y343 169 aa16.8■□□□□ 0.28
AP4E1-202ENST00000558439 NLRX1Q86UT6 975 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 HOOK3Q86VS8 718 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 ANKS1AQ92625 1134 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 MASTLQ96GX5 879 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 EDEM3Q9BZQ6 932 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 SYNCQ9H7C4 482 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 AFF2P51816 1311 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 CASP4P49662 377 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 ADCY1Q08828 1119 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 OR2W6PQ8NHA6 318 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 WHAMMQ8TF30 809 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 CHORDC1Q9UHD1 332 aaPredicted RBP16.79■□□□□ 0.28
AP4E1-202ENST00000558439 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 MMTAG2Q9BU76 263 aaKnown RBP16.79■□□□□ 0.28
AP4E1-202ENST00000558439 WDR11Q9BZH6 1224 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 DNAJC17Q9NVM6 304 aaKnown RBP16.79■□□□□ 0.28
AP4E1-202ENST00000558439 EXOC7Q9UPT5 735 aa16.79■□□□□ 0.28
AP4E1-202ENST00000558439 DAPK3O43293 454 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 PEX3P56589 373 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
AP4E1-202ENST00000558439 AEBP2Q6ZN18 517 aaPredicted RBP16.78■□□□□ 0.28
AP4E1-202ENST00000558439 CYP2W1Q8TAV3 490 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 ABCB11O95342 1321 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 SCN11AQ9UI33 1791 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 SMARCA1P28370 1054 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 CHRNA5P30532 468 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 GLE1Q53GS7 698 aaKnown RBP16.78■□□□□ 0.28
AP4E1-202ENST00000558439 CRAMP1Q96RY5 1269 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 SART1O43290 800 aaKnown RBP16.78■□□□□ 0.28
AP4E1-202ENST00000558439 MIIPQ5JXC2 388 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 SRLQ86TD4 932 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 SCFD1Q8WVM8 642 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 IFT74Q96LB3 600 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 CCDC77Q9BR77 488 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 VIPAS39Q9H9C1 493 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 FAM169AQ9Y6X4 670 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 RHBDL3P58872 404 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 C10orf76Q5T2E6 689 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 CAPN12Q6ZSI9 719 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 ZNF653Q96CK0 615 aa16.78■□□□□ 0.28
AP4E1-202ENST00000558439 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
AP4E1-202ENST00000558439 MXI1P50539 228 aa16.77■□□□□ 0.28
AP4E1-202ENST00000558439 FOXR1Q6PIV2 292 aa16.77■□□□□ 0.28
AP4E1-202ENST00000558439 CNKSR1Q969H4 720 aa16.77■□□□□ 0.28
AP4E1-202ENST00000558439 ZIM3Q96PE6 472 aa16.77■□□□□ 0.28
AP4E1-202ENST00000558439 TMOD4Q9NZQ9 345 aa16.77■□□□□ 0.28
AP4E1-202ENST00000558439 MAP2K7O14733 419 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 RAD51CO43502 376 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 MEA1Q16626 185 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 FIGNQ5HY92 759 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 FMO2Q99518 471 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 PLCD4Q9BRC7 762 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 NSRP1Q9H0G5 558 aaKnown RBP16.77■□□□□ 0.27
AP4E1-202ENST00000558439 KCNQ5Q9NR82 932 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.77■□□□□ 0.27
AP4E1-202ENST00000558439 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.27
AP4E1-202ENST00000558439 MYBL2P10244 700 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 GALCP54803 685 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 TRIP13Q15645 432 aaPredicted RBP16.77■□□□□ 0.27
AP4E1-202ENST00000558439 PADI6Q6TGC4 694 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 ARL8AQ96BM9 186 aa16.77■□□□□ 0.27
AP4E1-202ENST00000558439 STMN4Q9H169 189 aaPredicted RBP16.77■□□□□ 0.27
AP4E1-202ENST00000558439 PDXKO00764 312 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 HNRNPDLO14979 420 aaKnown RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 NAB2Q15742 525 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 FRMD5Q7Z6J6 570 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 PNMA8AQ86V59 439 aaPredicted RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 ZBED4O75132 1171 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 DR1Q01658 176 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 TAB3Q8N5C8 712 aaPredicted RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 EVI5O60447 810 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 ECM2O94769 699 aaPredicted RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 COPB2P35606 906 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 CACNA2D3Q8IZS8 1091 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 LXNQ9BS40 222 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 TAF1DQ9H5J8 278 aaPredicted RBP16.76■□□□□ 0.27
AP4E1-202ENST00000558439 PRR12Q9ULL5 1215 aa16.76■□□□□ 0.27
AP4E1-202ENST00000558439 IRAK1P51617 712 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 PRELPP51888 382 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 MTMR9Q96QG7 549 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 RUSC1Q9BVN2 902 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 EYA4O95677 639 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 RPA1P27694 616 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 SHMT1P34896 483 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 PDE6CP51160 858 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 ZNF341Q9BYN7 854 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 CELF4Q9BZC1 486 aaKnown RBP16.75■□□□□ 0.27
AP4E1-202ENST00000558439 FAM114A2Q9NRY5 505 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 SLC16A4O15374 487 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 TTI1O43156 1089 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 GLI1P08151 1106 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 STRN3Q13033 797 aa16.75■□□□□ 0.27
AP4E1-202ENST00000558439 CREG2Q8IUH2 290 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms