RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TAF11Q15544 211 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ASIC2Q16515 512 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 C11orf91Q3C1V1 193 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 GNPTABQ3T906 1256 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ERMARDQ5T6L9 678 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 THEMIS2Q5TEJ8 643 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SPICE1Q8N0Z3 855 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 BAP1Q92560 729 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CALML4Q96GE6 196 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF512BQ96KM6 892 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF570Q96NI8 536 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC4CQ9HCJ2 640 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ABCF3Q9NUQ8 709 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SHANK3Q9BYB0 1731 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 F8VZ95 297 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CCNT1O60563 726 aaKnown RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 UBOX5O94941 541 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CSF1RP07333 972 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ITGA4P13612 1032 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 NQO1P15559 274 aaKnown RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ECHS1P30084 290 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 KIF5BP33176 963 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ALDH5A1P51649 535 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ATP11AP98196 1134 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PFKFB3Q16875 520 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 FAM83BQ5T0W9 1011 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 DENND2CQ68D51 928 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PEX26Q7Z412 305 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TMC3Q7Z5M5 1100 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 KIAA0895Q8NCT3 520 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ANKS1AQ92625 1134 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 FMO2Q99518 471 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TRIM51Q9BSJ1 452 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 MTA3Q9BTC8 594 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 OSBPL1AQ9BXW6 950 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 AZI2Q9H6S1 392 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 MPHOSPH10O00566 681 aaKnown RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 DDAH1O94760 285 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SHBGP04278 402 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 GSTA1P08263 222 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PAEPP09466 180 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PRELPP51888 382 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ADCY2Q08462 1091 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SLMAPQ14BN4 828 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SLC18A3Q16572 532 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 DOK7Q18PE1 504 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TBC1D10BQ4KMP7 808 aaPredicted RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 STYK1Q6J9G0 422 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 MIS18BP1Q6P0N0 1132 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SV2BQ7L1I2 683 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ERICH1Q86X53 443 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 C4orf32Q8N8J7 132 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC15Q8TF66 581 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CCSER1Q9C0I3 900 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 DBNDD1Q9H9R9 158 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 CREBZFQ9NS37 354 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 PCDHA4Q9UN74 947 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SLC12A4Q9UP95 1085 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 SCAF8Q9UPN6 1271 aaKnown RBP5.51□□□□□ -1.53
HMG20A-204ENST00000558288 AGAP1Q9UPQ3 857 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 ATP6V0A2Q9Y487 856 aa5.51□□□□□ -1.53
HMG20A-204ENST00000558288 TSPY2A6NKD2 308 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SPDYE3A6NKU9 549 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SMIM24O75264 130 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SMNDC1O75940 238 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SNUPNO95149 360 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ATP2A2P16615 1042 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PCK1P35558 622 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ECE1P42892 770 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SNX1Q13596 522 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ITIH4Q14624 930 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 LRRC14Q15048 493 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 IFI16Q16666 785 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ASTE1Q2TB18 679 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CCDC38Q502W7 563 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 HGSNATQ68CP4 663 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 FAM43BQ6ZT52 329 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PBKQ96KB5 322 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CAPNS2Q96L46 248 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 GLIS2Q9BZE0 524 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 TBC1D7Q9P0N9 293 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CEP72Q9P209 647 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PCDHGC5Q9Y5F6 944 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ITGB4P16144 1822 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 TLR2O60603 784 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 LUC7L3O95232 432 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PDHA1P08559 390 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 NEFHP12036 1026 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CCND1P24385 295 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 TXKP42681 527 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PLTPP55058 493 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 EIF3BP55884 814 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 HUNKP57058 714 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 RWDD2BP57060 319 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 DYNLL1P63167 89 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 MXRA7P84157 204 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms